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qh_1_scaffold_1214

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_1214_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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83..733
DNA (651bp) protein (217aa)
HAD-superfamily hydrolase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D3A0_9EURY
HAD-superfamily hydrolase {ECO:0000313|EMBL:ELZ29167.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED
qh_1_scaffold_1214_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(761..1480)
DNA (720bp) protein (240aa)
DNA topoisomerase type IA zn finger domain protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0Y1_9EURY
DNA topoisomerase type IA zn finger domain protein {ECO:0000313|EMBL:ELZ29166.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="
DNA topoisomerase I
qh_1_scaffold_1214_3
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1675..2211
DNA (537bp) protein (179aa)
AsnC family transcriptional regulator n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LWQ8_9EURY
AsnC family transcriptional regulator
AsnC family transcriptional regulator {ECO:0000313|EMBL:KDE57227.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola
qh_1_scaffold_1214_4
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2268..2468)
DNA (201bp) protein (67aa)
Monoamine oxidase regulatory protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N2H2_9EURY
Monoamine oxidase regulatory protein {ECO:0000313|EMBL:EMA52046.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus tha
monoamine oxidase regulatory protein
qh_1_scaffold_1214_5
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(2754..3956)
DNA (1203bp) protein (401aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35 4.2.1.17)
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AUU2_NATA1
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein {ECO:0000313|EMBL:ELZ02471.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialb
qh_1_scaffold_1214_6
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4187..5881
DNA (1695bp) protein (565aa)
acs3; long-chain acyl-CoA synthetase (EC:6.2.1.3)
AMP-dependent synthetase {ECO:0000313|EMBL:AHZ24029.1}; Long-chain acyl-CoA synthetase {ECO:0000313|EMBL:AFK20715.1}; EC=6.2.1.3 {ECO:0000313|EMBL:AFK20715.1};; TaxID=523841 species="Archaea; Euryarch
Long-chain acyl-CoA synthetase n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R905_HALMT
qh_1_scaffold_1214_7
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(5900..6991)
DNA (1092bp) protein (364aa)
Aminoglycoside phosphotransferase n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LUF9_9EURY
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:EMA36808.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratired
aminoglycoside phosphotransferase
qh_1_scaffold_1214_8
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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7178..7561
DNA (384bp) protein (128aa)
Acyl-CoA dehydrogenase n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9X990_9EURY
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ELY58290.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 1879
acyl-CoA dehydrogenase
qh_1_scaffold_1214_9
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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7558..8346
DNA (789bp) protein (263aa)
Acyl-CoA dehydrogenase n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9X990_9EURY
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ELY58290.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 1879
acyl-CoA dehydrogenase
qh_1_scaffold_1214_10
unknown

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comp(8347..8502)
DNA (156bp) protein (52aa)

This feature has no annotations

qh_1_scaffold_1214_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8839..9087)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D146_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29165.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
qh_1_scaffold_1214_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9356..11863)
DNA (2508bp) protein (836aa)
DEAD/DEAH box helicase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4S1_9EURY
DEAD/DEAH box helicase {ECO:0000313|EMBL:ELZ29164.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9
DEAD/DEAH box helicase
qh_1_scaffold_1214_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11927..13321)
DNA (1395bp) protein (465aa)
MATE efflux family protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2U2_9EURY
MATE efflux family protein {ECO:0000313|EMBL:ELZ29163.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps
qh_1_scaffold_1214_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13474..14307
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D141_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29160.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein rbh
qh_1_scaffold_1214_15
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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14834..15832
DNA (999bp) protein (333aa)
Transposase (ISH18) n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JEN3_9EURY
Transposase (ISH18) {ECO:0000313|EMBL:EMA23342.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM 1355
transposase (ISH18)
Displaying 15 items

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