ggKbase home page

qh_1_scaffold_458

Search features with annotation key words

Displaying 29 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_458_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

573..1481
DNA (909bp) protein (303aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1
Pyridoxal biosynthesis lyase PdxS n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CJX5_9EURY
pyridoxal biosynthesis lyase PdxS
qh_1_scaffold_458_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1675..2832
DNA (1158bp) protein (386aa)
Mechanosensitive ion channel n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNU9_9EURY
Mechanosensitive ion channel {ECO:0000313|EMBL:ELZ23519.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
MscS Mechanosensitive ion channel
qh_1_scaffold_458_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2894..3211)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLN2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23518.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
qh_1_scaffold_458_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3338..4264)
DNA (927bp) protein (309aa)
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.89 {ECO:0000256|HAMAP-Rule:MF_01139};; Undecaprenyl diphosphate synt
Undecaprenyl pyrophosphate synthase (EC:2.5.1.31)
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CMB9_9EURY
qh_1_scaffold_458_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4427..5827)
DNA (1401bp) protein (467aa)
IclR-like transcriptional regulator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CHH9_9EURY
IclR-like transcriptional regulator {ECO:0000313|EMBL:ELZ31517.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricu
hypothetical protein
qh_1_scaffold_458_6
unknown

Not on your lists

comp(6264..6593)
DNA (330bp) protein (110aa)

This feature has no annotations

qh_1_scaffold_458_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6756..7625)
DNA (870bp) protein (290aa)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud
tRNA pseudouridine synthase b (EC:4.2.1.70)
Probable tRNA pseudouridine synthase B n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CJQ5_9EURY
qh_1_scaffold_458_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7625..8203)
DNA (579bp) protein (193aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS00054797}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00239};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS0005
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CJK3_9EURY
qh_1_scaffold_458_9
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8375..8809)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P4Q9_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48081.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qh_1_scaffold_458_10
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9135..9425
DNA (291bp) protein (97aa)
Transcriptional regulator PadR-like family protein n=2 Tax=Halorhabdus tiamatea SARL4B RepID=U2F7Z9_9EURY
transcriptional regulator, PadR family
Transcriptional regulator, PadR family {ECO:0000313|EMBL:CCQ34671.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus
qh_1_scaffold_458_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9972..10916)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLG0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23468.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_1_scaffold_458_12
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11109..11804)
DNA (696bp) protein (232aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
Adenylate kinase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IYQ4_HALVA
adenylate kinase
qh_1_scaffold_458_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12173..12493
DNA (321bp) protein (107aa)
Ubiquinone/menaquinone biosynthesis methyltransferase UbiE n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CJP9_9EURY
Ubiquinone/menaquinone biosynthesis methyltransferase UbiE {ECO:0000313|EMBL:ELZ23466.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;"
ubiquinone/menaquinone biosynthesis methyltransferase UbiE
qh_1_scaffold_458_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12543..14030)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CKG9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23113.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_1_scaffold_458_15
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14118..15764
DNA (1647bp) protein (549aa)
TrkA-C domain-containing protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BKS9_9EURY
TrkA-C domain-containing protein {ECO:0000313|EMBL:ELZ10239.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermot
TrkA-C domain-containing protein
qh_1_scaffold_458_16
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15833..16516
DNA (684bp) protein (228aa)
K+ transporter, NAD-binding protein n=1 Tax=Halogranum salarium B-1 RepID=J3EYF3_9EURY
K+ transporter, NAD-binding protein {ECO:0000313|EMBL:EJN60367.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
k+ transporter, NAD-binding protein
qh_1_scaffold_458_17
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16519..18120
DNA (1602bp) protein (534aa)
Trk-type k+ transporter, membrane component n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HFG2_9EURY
Trk-type k+ transporter, membrane component {ECO:0000313|EMBL:ESP89425.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" sourc
trkG; Trk potassium uptake system protein
qh_1_scaffold_458_18
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18237..20642)
DNA (2406bp) protein (802aa)
Amino acid permease-associated region n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RQY9_HALTV
amino acid permease
Amino acid permease-associated region {ECO:0000313|EMBL:ADB60470.1}; Flags: Precursor;; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source
qh_1_scaffold_458_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20880..22331)
DNA (1452bp) protein (484aa)
Potassium transporter peripheral membrane component n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CL75_9EURY
Potassium transporter peripheral membrane component {ECO:0000313|EMBL:ELZ23117.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source=
trkA2; potassium uptake protein TrkA
qh_1_scaffold_458_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22575..24098
DNA (1524bp) protein (508aa)
Trk-type potassium transport system, permease TrkH n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CKH3_9EURY
Trk-type potassium transport system, permease TrkH {ECO:0000313|EMBL:ELZ23118.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="
potassium transporter TrkH
qh_1_scaffold_458_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24265..26157
DNA (1893bp) protein (631aa)
Sodium/proton antiporter, CPA1 family protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CMM1_9EURY
Sodium/proton antiporter, CPA1 family protein {ECO:0000313|EMBL:ELZ23119.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halos
nhaP; putative potassium transport protein kefC
qh_1_scaffold_458_22
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26383..26676
DNA (294bp) protein (98aa)
UspA domain protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCH8_9EURY
UspA domain-containing protein
UspA domain protein {ECO:0000313|EMBL:EMA55283.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989
qh_1_scaffold_458_23
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26740..27483
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C539_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ17019.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
hypothetical protein
qh_1_scaffold_458_24
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27719..28024
DNA (306bp) protein (102aa)
amino acid transporter n=1 Tax=Halorubrum sp. T3 RepID=UPI000367BA88
Amino acid transporter {ECO:0000313|EMBL:ELZ82144.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
amino acid permease-associated region
qh_1_scaffold_458_25
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28048..28983)
DNA (936bp) protein (312aa)
DNA adenine methylase (EC:2.1.1.72)
DNA adenine methylase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIL3_9EURY
DNA adenine methylase {ECO:0000313|EMBL:ELZ23120.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-
qh_1_scaffold_458_26
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29042..29587)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWV9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50051.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_1_scaffold_458_27
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29615..31024)
DNA (1410bp) protein (470aa)
Oligopeptide/dipeptide ABC transporter ATPase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FK60_9EURY
Oligopeptide/dipeptide ABC transporter ATPase {ECO:0000313|EMBL:ELZ58954.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubru
oligopeptide/dipeptide ABC transporter, ATP-binding protein
qh_1_scaffold_458_28
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(31017..32237)
DNA (1221bp) protein (407aa)
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase protein I n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0EAA0_9EURY
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase protein I {ECO:0000313|EMBL:ELZ43812.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Hal
dppD5; putative dipeptides/oligopeptides ABC transporter ATP-binding protein
qh_1_scaffold_458_29
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(32238..32375)
DNA (138bp) protein (46aa)
Peptide/nickel transport system permease protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQV1_9EURY
Binding-protein-dependent transporters inner membrane component {ECO:0000313|EMBL:EJN59306.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Hal
abc01p_2; dipeptide/oligopeptide/nickel ABC transporter permease
Displaying 29 items

View Taxonomy