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qh_1_scaffold_188_23

Organism: QH_1_Halosimplex_carlsbadense_67_29

near complete RP 30 / 55 MC: 3 BSCG 28 / 51 MC: 2 ASCG 35 / 38 MC: 5
Location: comp(21099..21296)

Top 3 Functional Annotations

Value Algorithm Source
rpoE2; DNA-directed RNA polymerase subunit E'' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 65.0
  • Bit_score: 111
  • Evalue 9.40e-23
Transcription elongation factor Spt4 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D171_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 65.0
  • Bit_score: 129
  • Evalue 1.60e-27
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimple similarity UNIPROT
DB: UniProtKB
  • Identity: 92.3
  • Coverage: 65.0
  • Bit_score: 129
  • Evalue 2.20e-27

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Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 198
ATGGCCGACAGACTGGTCTGTCGCGAGTGCCACCGCGTGCAGGAGTCCGAGGAAGCGGAGACATGCGTCTCCTGTGGCTCCTCGTCGCTGACGGAGGACTGGGCGGGCTACGTCGTCATCGGCCACCCGGACCGCAGCCGCATCGCCGAGGAGATGGGCGTCACCGAACCCGGGCAGTACGCGCTGAAGGTCCGCTAG
PROTEIN sequence
Length: 66
MADRLVCRECHRVQESEEAETCVSCGSSSLTEDWAGYVVIGHPDRSRIAEEMGVTEPGQYALKVR*