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qh_1_scaffold_188

Search features with annotation key words

Displaying items 1-30 of 74 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_188_1
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..313)
DNA (312bp) protein (104aa)
Phenazine biosynthesis protein n=2 Tax=Haloarcula hispanica RepID=V5TQ66_HALHI
phzC; putative phenazine biosynthesis protein
Phenazine biosynthesis protein {ECO:0000313|EMBL:AHB67233.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica
qh_1_scaffold_188_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(390..1157)
DNA (768bp) protein (256aa)
Type 11 methyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D258_9EURY
Type 11 methyltransferase {ECO:0000313|EMBL:ELZ29510.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
methyltransferase family protein
qh_1_scaffold_188_3
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1265..2104)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BR16_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ12537.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624.;"
restriction endonuclease
qh_1_scaffold_188_4
unknown

Not on your lists

2134..2241
DNA (108bp) protein (36aa)

This feature has no annotations

qh_1_scaffold_188_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2682..3623)
DNA (942bp) protein (314aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181
ribonuclease Z (EC:3.1.26.11)
Ribonuclease Z n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY67_9EURY
qh_1_scaffold_188_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3682..4194)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY79_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ28175.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_1_scaffold_188_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4433..5623
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1Y9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ28174.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_1_scaffold_188_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


5762..8536
DNA (2775bp) protein (925aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017576}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017588};; Alanyl-tRNA synthetase {ECO:0000256
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0G7_9EURY
qh_1_scaffold_188_9
unknown

Not on your lists

comp(8616..8771)
DNA (156bp) protein (52aa)

This feature has no annotations

qh_1_scaffold_188_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9055..9333)
DNA (279bp) protein (93aa)
Sulfur carrier protein ThiS n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY74_9EURY
Sulfur carrier protein ThiS {ECO:0000313|EMBL:ELZ28170.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadens
sulfur carrier protein ThiS
qh_1_scaffold_188_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9356..10120)
DNA (765bp) protein (255aa)
TrkA-C domain-containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1Y5_9EURY
TrkA-C domain-containing protein {ECO:0000313|EMBL:ELZ28169.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsb
qh_1_scaffold_188_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10716..12020)
DNA (1305bp) protein (435aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000256|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000256|HAMAP-Rule:MF_01281};; EC
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4W5_9EURY
S-adenosylhomocysteine deaminase
qh_1_scaffold_188_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12085..13332)
DNA (1248bp) protein (416aa)
HtpX protease-like protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1A1_9EURY
HtpX protease-like protein {ECO:0000313|EMBL:ELZ29220.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
hypothetical protein
qh_1_scaffold_188_14
unknown

Not on your lists

comp(13329..13616)
DNA (288bp) protein (96aa)

This feature has no annotations

qh_1_scaffold_188_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13793..14641
DNA (849bp) protein (283aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-R
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D3E8_9EURY
qh_1_scaffold_188_16
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14687..16312)
DNA (1626bp) protein (542aa)
Gamma-glutamyltransferase n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VP36_9EURY
Gamma-glutamyltransferase {ECO:0000313|EMBL:ELY38919.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33
gamma-glutamyltransferase 2
qh_1_scaffold_188_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16379..16819)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4W9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29224.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_1_scaffold_188_18
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16970..17530)
DNA (561bp) protein (187aa)
TATA-box-binding protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1A7_9EURY
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA-box factor {E
TATA-box binding family protein
qh_1_scaffold_188_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17773..18828
DNA (1056bp) protein (352aa)
RNA methylase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D138_9EURY
RNA methylase {ECO:0000313|EMBL:ELZ29226.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
RNA methyltransferase
qh_1_scaffold_188_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18865..19905
DNA (1041bp) protein (347aa)
thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D3F3_9EURY
Thymidylate synthase {ECO:0000313|EMBL:ELZ29227.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1
qh_1_scaffold_188_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19908..20414
DNA (507bp) protein (169aa)
dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase region n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2Z7_9EURY
Dihydrofolate reductase region {ECO:0000313|EMBL:ELZ29228.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
qh_1_scaffold_188_22
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20546..21097)
DNA (552bp) protein (184aa)
UPF0218 protein C475_03194 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4U0_9EURY
UPF0218 protein C475_03194 {ECO:0000256|HAMAP-Rule:MF_00590}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
hypothetical protein
qh_1_scaffold_188_23
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21099..21296)
DNA (198bp) protein (66aa)
rpoE2; DNA-directed RNA polymerase subunit E'' (EC:2.7.7.6)
Transcription elongation factor Spt4 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D171_9EURY
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimple
qh_1_scaffold_188_24
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(21296..21874)
DNA (579bp) protein (193aa)
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:ELZ29191.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ELZ29191.1};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
DNA-directed RNA polymerase subunit E n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D105_9EURY
DNA-directed RNA polymerase subunit E'
qh_1_scaffold_188_25
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21876..22256)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D3C1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29192.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_1_scaffold_188_26
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(22253..23095)
DNA (843bp) protein (281aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2W6_9EURY
Translation initiation factor 2 subunit gamma {ECO:0000256|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; TaxID=797114 species="Arch
translation initiation factor IF-2 subunit gamma
qh_1_scaffold_188_27
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23095..23382)
DNA (288bp) protein (96aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2W6_9EURY
Suspect SCG annotation. See neighboring gene [qh_1_scaffold_188_26].
Translation initiation factor 2 subunit gamma {ECO:0000256|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; TaxID=797114 species="Arch
translation initiation factor 2 subunit gamma
qh_1_scaffold_188_28
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23678..24889
DNA (1212bp) protein (404aa)
Transposase IS1341 n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SNV6_9EURY
Transposase, IS605 OrfB family {ECO:0000313|EMBL:AKH97483.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarch
IS1341-type transposase
qh_1_scaffold_188_29
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25027..25443)
DNA (417bp) protein (139aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4U2_9EURY
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:ELZ29194.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="H
multi-sensor signal transduction histidine kinase
qh_1_scaffold_188_30
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25583..26482
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D176_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29195.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
ArsR family transcriptional regulator
Displaying items 1-30 of 74 in total

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