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qh_1_scaffold_262_4

Organism: QH_1_Halosimplex_carlsbadense_67_29

near complete RP 30 / 55 MC: 3 BSCG 28 / 51 MC: 2 ASCG 35 / 38 MC: 5
Location: 1246..2769

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein AU-1 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D442_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 510.0
  • Bit_score: 824
  • Evalue 7.80e-236
RNA-binding protein AU-1 {ECO:0000256|HAMAP-Rule:MF_01910}; AU-binding protein {ECO:0000256|HAMAP-Rule:MF_01910}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 81.4
  • Coverage: 510.0
  • Bit_score: 824
  • Evalue 1.10e-235
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 491.0
  • Bit_score: 576
  • Evalue 1.00e-161

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Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1524
ATGAGCGACGACGCCGACGGGTCGGACTCGGACGCGACCACGGCCAGCGACGCCCCGACCGTCCGCGTCCGTGGTATCTACACGACCGCGCTGACGCGGCTGTTCGAGGACGGAGGGCTGTCGGTCGTGCAGGCGTCGCCGCCGATCCGCGGCCGGTTCGACGACGAGTTCGCGGTCGCACCCGCCGACGCGACCGTGTCGACGACCGACGACCGTCAGGGGGTCGGGATCACCGGCGACGCGAGCGCTGTCGCGACGGCCGTCGCCGAAGCGCAGTCGGTCGGCCGCGACGCGATGGTCTGGCGGGACCCGACGCCCCGCGGCGCGGTCTACGCCGGCGAAGTCGCGGAGACGCTCGGGAGCGGCGCGGTCGTCGAACTGGGCGACGGCGCGGTCCCGGACGGCGCAGACGAAGACGGTGACGACGACGCGACCGACGCTGCACTCCCGTCGGTCGCCGGCGGCGGTCGCGAGGGCTTTCTCCCCTACTCGAAGACGGCGACGCACGTCGAGACCGGCGACCGCCTGCGCGTTCAGGTCAAAGAGGTCGCGGCGCCGTGGGGGAACGGCCGACCGGTCCTCGACACCACGGTGCGCGTCCAGGGCGGGCTCGCGTCGCTCGTCCGCGGCACCTCTCCGGACACCAGCGGTCCCGAGCTGGCGGACCTCGTCCCGACCGACTCGCCGGAGGGGTGGGGGATCGACTGGGACCGGGCGGCCGACGACGCCGACCTCGACGCGCTGGGCGACGCGCTCGAGGCCCTCGGCGACCGAGCGGCGGCGCTCGACGACGCCTTCGCCGACGCGCCGGCGCCCGACGAGGCCGCGCCCCACTGCTACTGGCCGGGGGAAACGACGGCATGGCTCTGGTTCGGGCGCGAGTCGCGGTTCGGGCTCGACGAGCGCCGGCGCGCGGTCACGGCGACGATGGGCGGTCACCACCGCGTGAAGGCCGGCACCGAGAGCGCCAGCGCGGCGGTTGACTTCGTCGAGGCGGTGTGCCCCGACGTCGGAGGCGAGGAGACTGACTTCCCCTTCGACGCCGTCACGTGGCAGTTCGGCCCGACGGCGGGCGACTCCGTCCGGCTCGACCACGGCAAGCCCGACGGACGCATGTTCTCGCTCGGAACGGGCGACGTGACGCGTCGCGACGCCGACGGGACGGTCGTCGTCGAACGCGAGATGTCCGGGCGCGGCACGTACGACGCGCTCGGCGTCGACCAGCAGGCCGGCGACGTGGCCGTGACGAAACTCACCGAGGGCAAGTGGTGGTACCCGACGGTCTACCGCGGCGAGGACGGCGCCAAGCGCGGCACGTACGTCAATATCTGCACGCCCGTCGAGGTGTTCCCGTCGGCCGTTCGGTACGTCGACCTCCACGTCGACGTGGTCAAGCACGCCGACGGGACGGTCGAACGGGTCGACGACGACGAACTCGACGCCGCCGTCGACGCCGGACACGTCTCCGAGGCGCTGGCCGAGAAGGCCCGGAGCGTCGCCGCGGCGGTCGAGAACGCCCTCTGA
PROTEIN sequence
Length: 508
MSDDADGSDSDATTASDAPTVRVRGIYTTALTRLFEDGGLSVVQASPPIRGRFDDEFAVAPADATVSTTDDRQGVGITGDASAVATAVAEAQSVGRDAMVWRDPTPRGAVYAGEVAETLGSGAVVELGDGAVPDGADEDGDDDATDAALPSVAGGGREGFLPYSKTATHVETGDRLRVQVKEVAAPWGNGRPVLDTTVRVQGGLASLVRGTSPDTSGPELADLVPTDSPEGWGIDWDRAADDADLDALGDALEALGDRAAALDDAFADAPAPDEAAPHCYWPGETTAWLWFGRESRFGLDERRRAVTATMGGHHRVKAGTESASAAVDFVEAVCPDVGGEETDFPFDAVTWQFGPTAGDSVRLDHGKPDGRMFSLGTGDVTRRDADGTVVVEREMSGRGTYDALGVDQQAGDVAVTKLTEGKWWYPTVYRGEDGAKRGTYVNICTPVEVFPSAVRYVDLHVDVVKHADGTVERVDDDELDAAVDAGHVSEALAEKARSVAAAVENAL*