ggKbase home page

qh_1_scaffold_262

Search features with annotation key words

Displaying items 1-30 of 48 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_262_1
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(226..492)
DNA (267bp) protein (89aa)
Thioredoxin n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2D4_9EURY
trxA3; thioredoxin
Thioredoxin {ECO:0000313|EMBL:EMA15650.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC 33800.;"
qh_1_scaffold_262_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

636..794
DNA (159bp) protein (53aa)
Preprotein translocase subunit SecG n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D273_9EURY
Preprotein translocase subunit SecG {ECO:0000256|HAMAP-Rule:MF_00751}; Protein transport protein Sec61 subunit beta homolog {ECO:0000256|HAMAP-Rule:MF_00751}; TaxID=797114 species="Archaea; Euryarchae
preprotein translocase subunit secG
qh_1_scaffold_262_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

875..1249
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZM6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51041.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_1_scaffold_262_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1246..2769
DNA (1524bp) protein (508aa)
RNA-binding protein AU-1 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D442_9EURY
RNA-binding protein AU-1 {ECO:0000256|HAMAP-Rule:MF_01910}; AU-binding protein {ECO:0000256|HAMAP-Rule:MF_01910}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
hypothetical protein
qh_1_scaffold_262_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2636..4279)
DNA (1644bp) protein (548aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D637_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29604.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
LVIVD repeat-containing protein
qh_1_scaffold_262_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4325..5944)
DNA (1620bp) protein (540aa)
LVIVD repeat-containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2D8_9EURY
LVIVD repeat-containing protein {ECO:0000313|EMBL:ELZ29605.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsba
LVIVD repeat-containing protein
qh_1_scaffold_262_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5975..6679
DNA (705bp) protein (235aa)
Probable GTP-binding protein EngB n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D276_9EURY
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex c
GTP-binding protein
qh_1_scaffold_262_8
unknown

Not on your lists

comp(6761..6892)
DNA (132bp) protein (44aa)

This feature has no annotations

qh_1_scaffold_262_9
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6997..7269)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y7S0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY69701.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
qh_1_scaffold_262_10
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7532..8014
DNA (483bp) protein (161aa)
Putative transcriptional regulator, AsnC family n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NPP3_HALUD
transcriptional regulator, AsnC family
Putative transcriptional regulator, AsnC family {ECO:0000313|EMBL:ACV12889.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Hal
qh_1_scaffold_262_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8144..9793
DNA (1650bp) protein (550aa)
Putative signal-transducing histidine kinase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4K2_9EURY
Putative signal-transducing histidine kinase {ECO:0000313|EMBL:ELZ29607.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosi
hypothetical protein
qh_1_scaffold_262_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9959..10252)
DNA (294bp) protein (98aa)
Protein translation factor SUI1 homolog n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D447_9EURY
Protein translation factor SUI1 homolog {ECO:0000256|HAMAP-Rule:MF_00604, ECO:0000256|PIRNR:PIRNR037511}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
translation initiation factor Sui1
qh_1_scaffold_262_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10435..12690)
DNA (2256bp) protein (752aa)
Transglutaminase domain protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D640_9EURY
Transglutaminase domain protein {ECO:0000313|EMBL:ELZ29609.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsba
transglutaminase
qh_1_scaffold_262_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12687..13706)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2E2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29610.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_1_scaffold_262_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13706..14674)
DNA (969bp) protein (323aa)
Methanol dehydrogenase regulatory protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D280_9EURY
Methanol dehydrogenase regulatory protein {ECO:0000313|EMBL:ELZ29611.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimpl
ATPase
qh_1_scaffold_262_16
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14884..15261)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4K5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29612.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_1_scaffold_262_17
unknown

Not on your lists

15721..15984
DNA (264bp) protein (88aa)

This feature has no annotations

qh_1_scaffold_262_18
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16124..16630)
DNA (507bp) protein (169aa)
Protein tyrosine phosphatase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DG56_9EURY
Protein tyrosine phosphatase {ECO:0000313|EMBL:ELZ33139.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense
protein tyrosine phosphatase
qh_1_scaffold_262_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16946..17596)
DNA (651bp) protein (217aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D452_9EURY
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:ELZ29613.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriacea
2-dehydro-3-deoxyphosphogluconate aldolase
qh_1_scaffold_262_20
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18056..18433
DNA (378bp) protein (126aa)
Kef-type K+ transporter NAD-binding component n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EQ03_9EURY
Kef-type K+ transporter NAD-binding component {ECO:0000313|EMBL:ELZ48972.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubru
kch; Kef-type K+ transporter NAD-binding component
qh_1_scaffold_262_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18454..18828)
DNA (375bp) protein (125aa)
Cupin n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D644_9EURY
Cupin {ECO:0000313|EMBL:ELZ29614.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
cupin 2 barrel domain-containing protein
qh_1_scaffold_262_22
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18951..19859)
DNA (909bp) protein (303aa)
Malonate transporter n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2E6_9EURY
Malonate transporter {ECO:0000313|EMBL:ELZ29615.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1
hypothetical protein
qh_1_scaffold_262_23
unknown

Not on your lists

comp(19948..20067)
DNA (120bp) protein (40aa)

This feature has no annotations

qh_1_scaffold_262_24
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20142..20366)
DNA (225bp) protein (75aa)
Nitrite and sulfite reductase 4Fe-4S domain-containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D652_9EURY
Nitrite and sulfite reductase 4Fe-4S domain-containing protein {ECO:0000313|EMBL:ELZ29624.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex
qh_1_scaffold_262_25
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20845..21003
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2F3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29625.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_1_scaffold_262_26
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21150..22361)
DNA (1212bp) protein (404aa)
Signal recognition particle receptor FtsY n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D291_9EURY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobact
dpa; signal recognition particle receptor
qh_1_scaffold_262_27
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22368..22835)
DNA (468bp) protein (156aa)
Prefoldin subunit alpha n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4L7_9EURY
Prefoldin subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; GimC subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
prefoldin subunit alpha
qh_1_scaffold_262_28
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(22832..23005)
DNA (174bp) protein (58aa)
50S ribosomal protein L18Ae n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D464_9EURY
50S ribosomal protein L18Ae {ECO:0000256|HAMAP-Rule:MF_00273}; 50S ribosomal protein L20e {ECO:0000256|HAMAP-Rule:MF_00273}; 50S ribosomal protein LX {ECO:0000256|HAMAP-Rule:MF_00273}; TaxID=797114 sp
rplX; 50S ribosomal protein LX
qh_1_scaffold_262_29
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23207..23872)
DNA (666bp) protein (222aa)
Translation initiation factor 6 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D656_9EURY
Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032}; Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
translation initiation factor eIF-6
qh_1_scaffold_262_30
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23875..24153)
DNA (279bp) protein (93aa)
50S ribosomal protein L31e n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2F6_9EURY
50S ribosomal protein L31e {ECO:0000256|HAMAP-Rule:MF_00410}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
ribosomal protein L31E
Displaying items 1-30 of 48 in total

View Taxonomy