ggKbase home page

qh_1_scaffold_277

Search features with annotation key words

Displaying 19 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_277_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

548..1117
DNA (570bp) protein (190aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJ78_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:EMA44784.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
bacterio-opsin activator HTH domain-containing protein
qh_1_scaffold_277_2
unknown

Not on your lists

1673..1867
DNA (195bp) protein (65aa)

This feature has no annotations

qh_1_scaffold_277_3
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2000..2377)
DNA (378bp) protein (126aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N212_9EURY
qh_1_scaffold_277_4
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2382..3221)
DNA (840bp) protein (280aa)
Protein GrpE n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9X8F7_9EURY
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimn
molecular chaperone GrpE (heat shock protein)
qh_1_scaffold_277_5
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3377..4810
DNA (1434bp) protein (478aa)
Type III restriction protein res subunit n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M702_9EURY
Type III restriction protein res subunit {ECO:0000313|EMBL:EMA41582.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
helicase
qh_1_scaffold_277_6
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4861..5310)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L3H8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA28137.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
hypothetical protein
qh_1_scaffold_277_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5429..7012
DNA (1584bp) protein (528aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MW22_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49811.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_1_scaffold_277_8
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7143..7709)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQR8_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV10527.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
qh_1_scaffold_277_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7706..8614)
DNA (909bp) protein (303aa)
RNA methylase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MD55_9EURY
RNA methylase {ECO:0000313|EMBL:EMA43283.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;
NOL1/NOP2/sun family putative RNA methylase
qh_1_scaffold_277_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8846..9583
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVP1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49817.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
PAC2 family protein
qh_1_scaffold_277_11
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9848..10318)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W766_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN00783.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
qh_1_scaffold_277_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10707..12110
DNA (1404bp) protein (468aa)
Selenium-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5S0_9EURY
Selenium-binding protein {ECO:0000313|EMBL:EMA53277.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
56kDa selenium binding protein (SBP56)
qh_1_scaffold_277_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12188..12535
DNA (348bp) protein (116aa)
Ferredoxin n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHE4_9EURY
Ferredoxin {ECO:0000313|EMBL:EMA44768.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
fdx; ferredoxin
qh_1_scaffold_277_14
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12697..12993
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RT68_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB60948.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
qh_1_scaffold_277_15
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13088..13420)
DNA (333bp) protein (111aa)
Dihydroneopterin aldolase {ECO:0000256|HAMAP-Rule:MF_02130}; Short=DHNA {ECO:0000256|HAMAP-Rule:MF_02130};; EC=4.1.2.25 {ECO:0000256|HAMAP-Rule:MF_02130};; 7,8-dihydroneopterin aldolase {ECO:0000256|H
Dihydroneopterin aldolase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QTW6_9EURY
hypothetical protein
qh_1_scaffold_277_16
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13523..14134
DNA (612bp) protein (204aa)
Translation initiation factor IF-2 subunit beta n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N7B9_9EURY
Translation initiation factor IF-2 subunit beta {ECO:0000313|EMBL:EMA53842.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
translation initiation factor IF2/IF5
qh_1_scaffold_277_17
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14263..15009
DNA (747bp) protein (249aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JNT6_NATP1
nucleoside-diphosphate-sugar epimerase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ELY71865.1}; Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:AGB33200.1}; Flags: Precursor;; TaxID=797303 species="Archaea; Euryarchaeota
qh_1_scaffold_277_18
unknown

Not on your lists

15175..15495
DNA (321bp) protein (107aa)

This feature has no annotations

qh_1_scaffold_277_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15473..15613)
DNA (141bp) protein (47aa)
Transposase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N293_9EURY
Transposase {ECO:0000313|EMBL:EMA51254.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
Displaying 19 items

View Taxonomy