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qh_1_scaffold_3

Search features with annotation key words

Displaying items 1-30 of 47 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_3_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..378
DNA (378bp) protein (126aa)
dut; dUTP diphosphatase (EC:3.6.1.23)
DUTP diphosphatase {ECO:0000313|EMBL:CCQ35742.1}; EC=3.6.1.23 {ECO:0000313|EMBL:CCQ35742.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomona
DUTP diphosphatase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XP45_NATM8
qh_1_scaffold_3_2
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(439..3123)
DNA (2685bp) protein (895aa)
DNA double-strand break repair Rad50 ATPase n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y8X5_9EURY
DNA double-strand break repair Rad50 ATPase {ECO:0000256|HAMAP-Rule:MF_00449}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema
DNA double-strand break repair rad50 ATPase
qh_1_scaffold_3_3
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3133..4902)
DNA (1770bp) protein (590aa)
Metallophosphoesterase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XJJ9_9EURY
Metallophosphoesterase {ECO:0000313|EMBL:ELY61586.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongol
DNA double-strand break repair protein Mre11
qh_1_scaffold_3_4

Not on your lists

5221..7221
DNA (2001bp) protein (667aa)
Putative anaerobic dehydrogenase n=1 Tax=uncultured archaeon A07HB70 RepID=V4XXE8_9ARCH
Putative anaerobic dehydrogenase {ECO:0000313|EMBL:ESS06948.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
molybdopterin oxidoreductase
qh_1_scaffold_3_5
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7434..8345)
DNA (912bp) protein (304aa)
RIO kinase 2 protein {ECO:0000313|EMBL:ERJ04708.1}; EC=2.7.11.1 {ECO:0000313|EMBL:ERJ04708.1};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhab
Serine/threonine protein kinase n=2 Tax=Halorhabdus tiamatea SARL4B RepID=S6D3H7_9EURY
serine/threonine protein kinase
qh_1_scaffold_3_6

Not on your lists

8541..9707
DNA (1167bp) protein (389aa)
trpB2; probable tryptophan synthase beta subunit (EC:4.2.1.20)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A
Tryptophan synthase beta chain n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y6V1_9ARCH
qh_1_scaffold_3_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9775..10173
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDA3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43752.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
qh_1_scaffold_3_8

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comp(10201..10791)
DNA (591bp) protein (197aa)
Sortase related acyltransferase n=1 Tax=uncultured archaeon A07HB70 RepID=V4XX02_9ARCH
Sortase related acyltransferase {ECO:0000313|EMBL:ESS06778.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
acetyltransferase
qh_1_scaffold_3_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10947..11765
DNA (819bp) protein (273aa)
lplA; lipoate-protein ligase (EC:2.7.7.63)
Biotin/lipoate A/B protein ligase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZL8_9EURY
Biotin/lipoate A/B protein ligase {ECO:0000313|EMBL:EMA49870.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifo
qh_1_scaffold_3_10
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(11856..12515)
DNA (660bp) protein (220aa)
Peroxiredoxin n=1 Tax=Halogranum salarium B-1 RepID=J3A5Y4_9EURY
Peroxiredoxin {ECO:0000313|EMBL:EJN60893.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
peroxiredoxin
qh_1_scaffold_3_11
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(12512..13048)
DNA (537bp) protein (179aa)
Peroxiredoxin n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D512_9EURY
Peroxiredoxin {ECO:0000313|EMBL:ELZ29938.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.;
peroxiredoxin
qh_1_scaffold_3_12
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13373..14230
DNA (858bp) protein (286aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMA
Probable endonuclease 4 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NBW2_9EURY
DNA-(apurinic or apyrimidinic site) lyase
qh_1_scaffold_3_13
Penicillium rubens, Penicillium, Eurotiales, Eurotiomycetidae, Ascomycota, Fungi

Not on your lists

comp(14244..14507)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) RepID=B6GWI5_PENCW
Uncharacterized protein {ECO:0000313|EMBL:CAP46852.1}; TaxID=500485 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Penici
hypothetical protein
qh_1_scaffold_3_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14648..15310)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVT6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49867.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_1_scaffold_3_15
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15686..17683
DNA (1998bp) protein (666aa)
Glycoside hydrolase 15-like protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NBD2_9EURY
Glycoside hydrolase 15-like protein {ECO:0000313|EMBL:EMA53970.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thai
glycosyl hydrolase, glucoamylase
qh_1_scaffold_3_16
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17903..19999
DNA (2097bp) protein (699aa)
Glycoside hydrolase 15-like protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9W951_9EURY
Glycoside hydrolase 15-like protein {ECO:0000313|EMBL:ELY45974.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibe
glycoside hydrolase 15-like protein
qh_1_scaffold_3_17
unknown

Not on your lists

comp(19802..20266)
DNA (465bp) protein (155aa)

This feature has no annotations

qh_1_scaffold_3_18
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20269..21276
DNA (1008bp) protein (336aa)
N-type ATP pyrophosphatase superfamily protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N7X2_9EURY
N-type ATP pyrophosphatase superfamily protein {ECO:0000313|EMBL:EMA54017.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
PP-loop domain protein
qh_1_scaffold_3_19
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21495..22685)
DNA (1191bp) protein (397aa)
Cell division protein FtsZ n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWG5_HALMD
cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobiu
qh_1_scaffold_3_20
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22689..22895)
DNA (207bp) protein (69aa)
Putative transcriptional regulator, CopG family n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NMD4_HALUD
transcriptional regulator, CopG family
Putative transcriptional regulator, CopG family {ECO:0000313|EMBL:ACV12573.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Hal
qh_1_scaffold_3_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23121..23666)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MX13_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49863.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_1_scaffold_3_22
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24387..25376
DNA (990bp) protein (330aa)
Aldo/keto reductase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWE3_HALMD
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ACV46284.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (str
qh_1_scaffold_3_23
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25513..25974
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N0I7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51043.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_1_scaffold_3_24
unknown

Not on your lists

comp(26131..26580)
DNA (450bp) protein (150aa)

This feature has no annotations

qh_1_scaffold_3_25
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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26636..27832
DNA (1197bp) protein (399aa)
xaa-pro aminopeptidase id=24615945 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Xaa-pro aminopeptidase {ECO:0000313|EMBL:ESP88149.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobon
xaa-pro aminopeptidase
qh_1_scaffold_3_26
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27849..28388)
DNA (540bp) protein (180aa)
Homolog to restriction system mrr n=2 Tax=Haloquadratum walsbyi RepID=Q18DE5_HALWD
mrr; restriction system mrr-like protein
Homolog to restriction system mrr {ECO:0000313|EMBL:CAJ51122.2}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsb
qh_1_scaffold_3_27
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28529..29461)
DNA (933bp) protein (311aa)
hypothetical protein id=24621917 bin=Halonotius_J07HN6 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halonotius_J07HN6
Uncharacterized protein {ECO:0000313|EMBL:ERH00317.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
hypothetical protein
qh_1_scaffold_3_28
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29461..29694)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTD3_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB67211.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;
qh_1_scaffold_3_29
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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29896..30639
DNA (744bp) protein (248aa)
HAD superfamily hydrolase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D8V5_9EURY
HAD superfamily hydrolase {ECO:0000313|EMBL:ELZ30574.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
putative HAD superfamily hydrolase
qh_1_scaffold_3_30
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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30621..31805
DNA (1185bp) protein (395aa)
Probable cobalamin biosynthesis protein CobD n=1 Tax=Halobacterium sp. DL1 RepID=G4IIE1_9EURY
Probable cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="
cobalamin biosynthesis protein CobD
Displaying items 1-30 of 47 in total

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