ggKbase home page

qh_1_scaffold_31

Search features with annotation key words

Displaying items 1-30 of 85 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_31_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..121)
DNA (120bp) protein (40aa)
ABC transporter n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MNT7_9EURY
ABC transporter {ECO:0000313|EMBL:EMA47003.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350
ABC transporter
qh_1_scaffold_31_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(125..1504)
DNA (1380bp) protein (460aa)
Extracellular ligand-binding receptor n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMV2_9EURY
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EMA47002.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
extracellular ligand-binding receptor
qh_1_scaffold_31_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1787..2728)
DNA (942bp) protein (314aa)
Alpha/beta hydrolase fold-3 domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N973_9EURY
Alpha/beta hydrolase fold-3 domain-containing protein {ECO:0000313|EMBL:EMA53654.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sourc
alpha/beta hydrolase fold-3 domain-containing protein
qh_1_scaffold_31_4
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2926..4026
DNA (1101bp) protein (367aa)
NADH-dependent flavin oxidoreductase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M660_HALMO
NADH-dependent flavin oxidoreductase {ECO:0000313|EMBL:EMA40094.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morr
yqjM2; NADH-dependent flavin oxidoreductase
qh_1_scaffold_31_5
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4107..5105)
DNA (999bp) protein (333aa)
adh; alcohol dehydrogenase (EC:1.1.1.1); K00001 alcohol dehydrogenase [EC:1.1.1.1] id=24616548 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
adh; alcohol dehydrogenase (EC:1.1.1.1)
Alcohol dehydrogenase {ECO:0000313|EMBL:ESP87524.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonu
qh_1_scaffold_31_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5195..5761)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXN5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50063.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_1_scaffold_31_7
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5924..6349
DNA (426bp) protein (142aa)
Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N2V5_9EURY
Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein {ECO:0000313|EMBL:EMA51449.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
qh_1_scaffold_31_8
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6775..7302
DNA (528bp) protein (176aa)
Putative restriction/modification enzyme (Fragment) n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JPL0_9EURY
Putative restriction/modification enzyme {ECO:0000313|EMBL:EMA09914.1}; Flags: Fragment;; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" s
putative restriction/modification enzyme
qh_1_scaffold_31_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7421..8161
DNA (741bp) protein (247aa)
Putative restriction/modification enzyme n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5P0_9EURY
Putative restriction/modification enzyme {ECO:0000313|EMBL:EMA53191.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
N-6 DNA Methylase/Eco57I restriction endonuclease
qh_1_scaffold_31_10
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8676..9182
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K3V9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA16117.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
qh_1_scaffold_31_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9607..10188)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHM7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45206.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_1_scaffold_31_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10287..10595
DNA (309bp) protein (103aa)
Transcription initiation factor TFB 4 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKD9_9EURY
Transcription initiation factor TFB 4 {ECO:0000313|EMBL:EMA45204.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
tfbA_4; transcription initiation factor TFB 4
qh_1_scaffold_31_13
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10727..11218)
DNA (492bp) protein (164aa)
Phosphopantetheine adenylyltransferase {ECO:0000313|EMBL:ELZ36187.1}; EC=2.7.7.3 {ECO:0000313|EMBL:ELZ36187.1};; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacac
Phosphopantetheine adenylyltransferase n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SPN2_9EURY
phosphopantetheine adenylyltransferase
qh_1_scaffold_31_14
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11435..12265)
DNA (831bp) protein (277aa)
Transcriptional regulator TrmB n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LH83_9EURY
Transcriptional regulator TrmB {ECO:0000313|EMBL:EMA32438.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.
qh_1_scaffold_31_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12435..13514)
DNA (1080bp) protein (360aa)
Glutamate--cysteine ligase {ECO:0000255|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000255|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase {ECO:0000255|HAMAP-Rule:MF_01609}; Short=GCS {ECO:0000255
Carboxylate-amine ligase NP_3372A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=CAAL_NATPD
carboxylate-amine ligase
qh_1_scaffold_31_16
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(13636..14298)
DNA (663bp) protein (221aa)
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00351}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00351};; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobac
fib; fibrillarin-like rRNA/tRNA 2'-O-methyltransferase (EC:2.1.1.-)
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N153_9EURY
qh_1_scaffold_31_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(14295..15164)
DNA (870bp) protein (290aa)
Pre-mRNA processing ribonucleoprotein, binding domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MT46_9EURY
Pre-mRNA processing ribonucleoprotein, binding domain-containing protein {ECO:0000313|EMBL:EMA47919.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
nucleolar protein-like protein
qh_1_scaffold_31_18
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15360..17267
DNA (1908bp) protein (636aa)
ABC-type transport system ATP-binding/permease protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XYP9_NATM8
ABC-type transport system ATP-binding/permease protein
ABC-type transport system ATP-binding/permease protein {ECO:0000313|EMBL:CCQ35248.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" sou
qh_1_scaffold_31_19
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17379..17618)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3A342_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59753.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
qh_1_scaffold_31_20
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17953..18342
DNA (390bp) protein (130aa)
6-pyruvoyltetrahydropterin synthase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J9B4_HALJB
6-pyruvoyltetrahydropterin synthase
6-pyruvoyltetrahydropterin synthase {ECO:0000313|EMBL:ADJ16383.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalico
qh_1_scaffold_31_21
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18356..19543
DNA (1188bp) protein (396aa)
gth4; probable glycosyltransferase, type 1 (EC:2.4.-.-)
Glycosyl transferase group 1 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MRW4_9EURY
Glycosyl transferase group 1 {ECO:0000313|EMBL:EMA47200.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyt
qh_1_scaffold_31_22
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19530..20549
DNA (1020bp) protein (340aa)
Methyltransferase family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9L5_9EURY
Methyltransferase family protein {ECO:0000313|EMBL:EMA53345.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifod
hypothetical protein
qh_1_scaffold_31_23
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20718..21491
DNA (774bp) protein (258aa)
GTP cyclohydrolase III {ECO:0000256|HAMAP-Rule:MF_00608}; EC=3.5.4.29 {ECO:0000256|HAMAP-Rule:MF_00608};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
GTP cyclohydrolase III n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQV6_9EURY
GTP cyclohydrolase
qh_1_scaffold_31_24
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21733..22293
DNA (561bp) protein (187aa)
Putative signal transduction protein with CBS domains n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZH0_HALMD
signal transduction protein with CBS domains
Putative signal transduction protein with CBS domains {ECO:0000313|EMBL:ACV48738.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" sou
qh_1_scaffold_31_25
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22462..23847
DNA (1386bp) protein (462aa)
ABC-type transport system periplasmic substrate-binding protein (Probable substrate branched-chain amino acids) n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LM48_HALWC
livJ4; ABC-type transport system periplasmic substrate-binding protein (probable substrate branched-chain amino acids)
ABC-type transport system periplasmic substrate-binding protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CCC41168.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteri
qh_1_scaffold_31_26
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24470..25294)
DNA (825bp) protein (275aa)
ABC transporter n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NRS0_HALBP
branched-chain amino acid ABC transporter ATPase
ABC transporter {ECO:0000313|EMBL:ELY30365.1}; ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ADQ66857.1}; TaxID=469382 species="Archaea; Euryarchaeota; Haloba
qh_1_scaffold_31_27
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25291..26238)
DNA (948bp) protein (316aa)
Putative branched-chain amino acids ABC transporter ATP-binding protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IFI3_9EURY
Putative branched-chain amino acids ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ94229.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halofe
livG; ABC-type branched-chain amino acid transport systems, ATP-binding protein I
qh_1_scaffold_31_28
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26231..27685)
DNA (1455bp) protein (485aa)
Putative branched-chain amino acids ABC transporter permease n=4 Tax=Haloferax RepID=M0H2N3_HALL2
livM4; ABC-type transport system permease protein (probable substrate branched-chain amino acids)
Putative branched-chain amino acids ABC transporter permease {ECO:0000313|EMBL:ELZ86427.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" sou
qh_1_scaffold_31_29
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27682..28794)
DNA (1113bp) protein (371aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NRS3_HALBP
amino acid/amide ABC transporter membrane protein 1, haat family
Amino acid/amide ABC transporter membrane protein 1, HAAT family {ECO:0000313|EMBL:ADQ66860.1}; Amino acid/amide ABC transporter membrane protein 1, haat family {ECO:0000313|EMBL:ELY30368.1}; TaxID=46
qh_1_scaffold_31_30
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29026..30210
DNA (1185bp) protein (395aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1227455 species="Archaea;
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MRK0_9EURY
Displaying items 1-30 of 85 in total

View Taxonomy