ggKbase home page

qh_1_scaffold_35

Search features with annotation key words

Displaying items 1-30 of 89 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_35_1
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..168
DNA (168bp) protein (56aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CST3_9EURY
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:ELZ26271.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Haloge
glycerophosphoryl diester phosphodiesterase
qh_1_scaffold_35_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(323..643)
DNA (321bp) protein (107aa)
Protein secretion chaperonin CsaA n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHC9_9EURY
Protein secretion chaperonin CsaA {ECO:0000313|EMBL:EMA44094.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccha
protein secretion chaperonin CsaA
qh_1_scaffold_35_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

909..2522
DNA (1614bp) protein (538aa)
dnaG; probable bacterial-type DNA primase DnaG (EC:2.7.7.-)
DNA primase DnaG {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020821}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020820};; TaxID=268739 species="Archaea; Euryarch
DNA primase DnaG n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQW4_NATM8
qh_1_scaffold_35_4
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2658..3998)
DNA (1341bp) protein (447aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPA8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW94024.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qh_1_scaffold_35_5
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4081..4689
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LSS5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36213.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qh_1_scaffold_35_6
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4740..5687)
DNA (948bp) protein (316aa)
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.89 {ECO:0000256|HAMAP-Rule:MF_01139};; Undecaprenyl diphosphate synt
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEB7_9EURY
qh_1_scaffold_35_7
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5713..6297
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Natrinema sp. (strain J7-2) RepID=I7BMI3_NATSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ22072.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
qh_1_scaffold_35_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6326..7102
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MNG1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA47232.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_1_scaffold_35_9
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7705..8781
DNA (1077bp) protein (359aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|Rule
hemA2; glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase n=1 Tax=Halogranum salarium B-1 RepID=J2ZFD7_9EURY
qh_1_scaffold_35_10
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9455..10135
DNA (681bp) protein (227aa)
Haloacid dehalogenase domain protein hydrolase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQV4_9EURY
Haloacid dehalogenase domain protein hydrolase {ECO:0000313|EMBL:EFW93368.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Hal
pgp; 3-phosphoglycerate kinase
qh_1_scaffold_35_11

Not on your lists

comp(10065..12077)
DNA (2013bp) protein (671aa)
Molybdopterin molybdochelatase {ECO:0000313|EMBL:ESS02480.1}; EC=2.10.1.1 {ECO:0000313|EMBL:ESS02480.1};; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;
Molybdopterin molybdochelatase n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZJL0_9ARCH
molybdopterin molybdochelatase
qh_1_scaffold_35_12
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12294..12521
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=2 Tax=Haladaptatus paucihalophilus RepID=E7QQW1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93375.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
qh_1_scaffold_35_13
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12521..12778
DNA (258bp) protein (86aa)
Cytotoxic translational repressor of toxin-antitoxin stability system n=2 Tax=Archaea RepID=U1NZH1_9EURY
Cytotoxic translational repressor of toxin-antitoxin stability system {ECO:0000313|EMBL:ERH02929.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonot
RelE family protein
qh_1_scaffold_35_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12888..13205)
DNA (318bp) protein (106aa)
Small multidrug export protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MC12_9EURY
Small multidrug export protein {ECO:0000313|EMBL:EMA43281.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
small multidrug export protein
qh_1_scaffold_35_15
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13339..14601)
DNA (1263bp) protein (421aa)
Molybdopterin molybdochelatase n=1 Tax=Halogranum salarium B-1 RepID=J3JEX7_9EURY
molybdenum cofactor synthesis domain-containing protein
Molybdopterin molybdochelatase {ECO:0000313|EMBL:EJN58751.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
qh_1_scaffold_35_16
unknown

Not on your lists

14842..15408
DNA (567bp) protein (189aa)

This feature has no annotations

qh_1_scaffold_35_17
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15629..16108
DNA (480bp) protein (160aa)
Molecular chaperone n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DEW5_9EURY
Molecular chaperone {ECO:0000313|EMBL:ELZ33353.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 1
heat shock protein 20
qh_1_scaffold_35_18
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16121..17956
DNA (1836bp) protein (612aa)
ABC-1 domain-containing protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MSR4_HALMO
ABC-1 domain-containing protein {ECO:0000313|EMBL:EMA48393.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae
membrane protein
qh_1_scaffold_35_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(17999..19300)
DNA (1302bp) protein (434aa)
Alanyl-tRNA synthetase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MRC7_9EURY
Alanyl-tRNA synthetase {ECO:0000313|EMBL:EMA47918.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus D
alanyl-tRNA synthetase
qh_1_scaffold_35_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19729..21009
DNA (1281bp) protein (427aa)
Major facilitator superfamily protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNY2_9EURY
Major facilitator superfamily protein {ECO:0000313|EMBL:ELZ24951.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex c
major facilitator superfamily transporter
qh_1_scaffold_35_21
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21351..21659)
DNA (309bp) protein (103aa)
ocd3; ornithine cyclodeaminase (EC:4.3.1.12)
Ornithine cyclodeaminase {ECO:0000313|EMBL:ADE03915.1}; EC=4.3.1.12 {ECO:0000313|EMBL:ADE03915.1};; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax
Ornithine cyclodeaminase n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GXZ8_HALVD
qh_1_scaffold_35_22
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21662..22279)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZLG2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN61590.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
ornithine cyclodeaminase
qh_1_scaffold_35_23
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22436..23599
DNA (1164bp) protein (388aa)
FAD dependent oxidoreductase n=1 Tax=Halogranum salarium B-1 RepID=J3JI68_9EURY
FAD dependent oxidoreductase {ECO:0000313|EMBL:EJN61591.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
glycine/D-amino acid oxidase, deaminating
qh_1_scaffold_35_24
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23724..24128
DNA (405bp) protein (135aa)
Acyl-CoA dehydrogenase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJA3_9EURY
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EMA45438.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus D
acyl-CoA dehydrogenase domain protein
qh_1_scaffold_35_25
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24125..24874
DNA (750bp) protein (250aa)
acdA; acyl-CoA dehydrogenase (EC:1.3.99.-)
Acyl-CoA dehydrogenase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C739_9EURY
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ELZ17754.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891.
qh_1_scaffold_35_26
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24930..25640)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HGC1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP89765.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qh_1_scaffold_35_27
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25695..26342
DNA (648bp) protein (216aa)
Phosphoglycolate phosphatase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ML27_9EURY
Phosphoglycolate phosphatase {ECO:0000313|EMBL:EMA45439.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyt
haloacid dehalogenase superfamily enzyme, subfamily IA
qh_1_scaffold_35_28
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26309..26794)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LLP8_HALWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC40854.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
qh_1_scaffold_35_29
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27067..27354
DNA (288bp) protein (96aa)
HTR-like protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XNH7_9EURY
HTR-like protein {ECO:0000313|EMBL:ELY63349.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
HTR-like protein
qh_1_scaffold_35_30
unknown

Not on your lists

27507..27833
DNA (327bp) protein (109aa)

This feature has no annotations

Displaying items 1-30 of 89 in total

View Taxonomy