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qh_1_scaffold_56

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_56_1
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..441)
DNA (441bp) protein (147aa)
HTR-like protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E204_9EURY
HTR-like protein {ECO:0000313|EMBL:ELZ41053.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 14210.;"
PAS domain S-box
qh_1_scaffold_56_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(663..1523)
DNA (861bp) protein (287aa)
cytochrome c oxidase polypeptide III (EC:1.9.3.1)
Cytochrome c oxidase subunit III n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQF8_9EURY
Cytochrome c oxidase subunit III {ECO:0000313|EMBL:EMA47553.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacchar
qh_1_scaffold_56_3
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1662..2654
DNA (993bp) protein (331aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QW10_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EFW91423.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptat
oxidoreductase
qh_1_scaffold_56_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2720..3457)
DNA (738bp) protein (246aa)
Putative RNA methylase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAH5_9EURY
Putative RNA methylase {ECO:0000313|EMBL:EMA53655.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8
hypothetical protein
qh_1_scaffold_56_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3570..5327)
DNA (1758bp) protein (586aa)
AMP-dependent synthetase and ligase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMY4_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EMA47037.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
AMP-dependent synthetase and ligase
qh_1_scaffold_56_6
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5381..6499
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WQH8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY51446.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 106
hypothetical protein
qh_1_scaffold_56_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6592..7452)
DNA (861bp) protein (287aa)
Putative membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GTI6_SORC5
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CAN96952.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium
qh_1_scaffold_56_8
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7486..7908)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3EZ33_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60742.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
qh_1_scaffold_56_9
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8034..8654
DNA (621bp) protein (207aa)
Transcription regulator n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IMJ9_9EURY
Transcription regulator {ECO:0000313|EMBL:ELZ97965.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;
tetR2; transcription regulator
qh_1_scaffold_56_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8814..9323)
DNA (510bp) protein (170aa)
Acetyltransferase n=1 Tax=halophilic archaeon J07HX64 RepID=U1NW25_9EURY
Acetyltransferase {ECO:0000313|EMBL:ERH08280.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
acetyltransferase, N-acetylglutamate synthase
qh_1_scaffold_56_11
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9550..10377
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TWV4_9EURY
QueT transporter {ECO:0000313|EMBL:ERG98145.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum sp. J07HQX50.;"
hypothetical protein
qh_1_scaffold_56_12
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10405..12474
DNA (2070bp) protein (690aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SLN5_9EURY
ABC transporter-like protein
qh_1_scaffold_56_13

Not on your lists

12471..13256
DNA (786bp) protein (262aa)
ABC-type cobalt transport system, permease component CbiQ related transporter n=1 Tax=uncultured archaeon A07HR67 RepID=V4XLK5_9ARCH
ABC-type cobalt transport system, permease component CbiQ related transporter {ECO:0000313|EMBL:ESS02863.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR6
cobalt transport protein
qh_1_scaffold_56_14
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13629..15080)
DNA (1452bp) protein (484aa)
Aldehyde Dehydrogenase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DEI4_9EURY
Aldehyde Dehydrogenase {ECO:0000313|EMBL:ELZ33880.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JC
aldehyde dehydrogenase
qh_1_scaffold_56_15
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15265..16773)
DNA (1509bp) protein (503aa)
Metal-dependent cyclase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WQ31_9EURY
Metal-dependent cyclase {ECO:0000313|EMBL:ELY50448.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
hypothetical protein
qh_1_scaffold_56_16
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17024..18109
DNA (1086bp) protein (362aa)
Putative mandelate racemase n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0B8A8_NATA1
Putative mandelate racemase {ECO:0000313|EMBL:ELZ05889.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC
putative mandelate racemase
qh_1_scaffold_56_17
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18171..18971)
DNA (801bp) protein (267aa)
hydrolase ( hydroxyacylglutathione hydrolase ) 3 (EC:3.1.2.6)
Hydrolase ( hydroxyacylglutathione hydrolase ) 3 n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0C1J8_9EURY
Hydrolase (Hydroxyacylglutathione hydrolase) 3 {ECO:0000313|EMBL:ELZ17070.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloter
qh_1_scaffold_56_18
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19108..20298)
DNA (1191bp) protein (397aa)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WLS1_9EURY
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:ELY50425.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius
3-hydroxybutyryl-CoA dehydrogenase
qh_1_scaffold_56_19
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20867..21589
DNA (723bp) protein (241aa)
2-haloalkanoic acid dehalogenase, type II n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZB9_9EURY
2-haloalkanoic acid dehalogenase, type II {ECO:0000313|EMBL:EMA37714.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
haloacid dehalogenase I
qh_1_scaffold_56_20
unknown

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comp(21794..22042)
DNA (249bp) protein (83aa)

This feature has no annotations

qh_1_scaffold_56_21
Grimontia hollisae, Grimontia, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22147..23427)
DNA (1281bp) protein (427aa)
C4-dicarboxylate ABC transporter n=1 Tax=Enterovibrio calviensis RepID=UPI0002F3A6A1
TRAP-type C4-dicarboxylate transport system large permease component {ECO:0000313|EMBL:EEY71765.1}; TaxID=675812 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Grim
putative TRAP-type C4-dicarboxylate transport system, large permease component DctM
qh_1_scaffold_56_22
Grimontia hollisae, Grimontia, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23430..23981)
DNA (552bp) protein (184aa)
TRAP dicarboxylate transporter DctQ subunit n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I9P9_GRIHO
TRAP dicarboxylate transporter DctQ subunit {ECO:0000313|EMBL:EEY71764.1}; TaxID=675812 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Grimontia.;" source="Grimonti
dctQ6; TRAP transporter small permease subunit DctQ
qh_1_scaffold_56_23
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24095..25315)
DNA (1221bp) protein (407aa)
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9CXT0_9RHIZ
TRAP-type C4-dicarboxylate transport system, periplasmic component {ECO:0000313|EMBL:EDQ35717.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae;
hpsK; Dihydroxypropanesulfonate (DHPS) TRAP transporter
qh_1_scaffold_56_24
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

25417..26571
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SJG4_9EURY
putative sorbitol dehydrogenase Tax=RBG_16_Bathyarchaeota_48_13_curated
alcohol dehydrogenase
qh_1_scaffold_56_25
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26893..28077
DNA (1185bp) protein (395aa)
Peptidase M29 aminopeptidase II n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PD39_9EURY
Peptidase M29 aminopeptidase II {ECO:0000313|EMBL:EMA68032.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM
pepB_3; aminopeptidase ( leucyl aminopeptidase, aminopeptidase T) 3
qh_1_scaffold_56_26
unknown

Not on your lists

28278..28631
DNA (354bp) protein (118aa)

This feature has no annotations

qh_1_scaffold_56_27
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(28771..29250)
DNA (480bp) protein (160aa)
ArCOG04150 universal archaeal PUA-domain protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DXK6_9EURY
ArCOG04150 universal archaeal PUA-domain protein {ECO:0000313|EMBL:CDK41069.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Haloru
conserved protein with predicted RNA binding PUA domain
qh_1_scaffold_56_28
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29339..29641
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MF91_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43364.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_1_scaffold_56_29
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

30065..31402
DNA (1338bp) protein (446aa)
exoribonuclease II (EC:3.1.13.1)
Ribonuclease R n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0B044_9EURY
Ribonuclease R {ECO:0000313|EMBL:ELZ04160.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
qh_1_scaffold_56_30
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31592..31741
DNA (150bp) protein (50aa)
UPF0391 membrane protein HacjB3_14695 n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J949_HALJB
hypothetical protein
UPF0391 membrane protein HacjB3_14695 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halal
Displaying items 1-30 of 31 in total

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