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QH_1_Oscillatoriophycideae_48_107

In projects: QH_1

Consensus taxonomy: Oscillatoriophycideae  →  Cyanobacteria  →  Bacteria

Taxonomy override: Cyanobacteria

Displaying items 101-150 of 273 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_1_scaffold_1992
Phylum: Cyanobacteria (87.5%)
8 5483 bp 47.35 102.04 76.93
qh_1_scaffold_453
Species: Microcoleus sp. PCC 7113 (50%)
10 12392 bp 48.10 112.00 76.96
qh_1_scaffold_801
Class: Oscillatoriophycideae (50%)
8 8661 bp 48.96 106.22 77.17
qh_1_scaffold_321
Phylum: Cyanobacteria (86.67%)
15 13477 bp 47.95 105.98 77.20
qh_1_scaffold_211
Class: Oscillatoriophycideae (63.16%)
19 16723 bp 48.02 110.42 77.30
qh_1_scaffold_939
Phylum: Cyanobacteria (70%)
10 7836 bp 47.60 109.44 77.45
qh_1_scaffold_410
Class: Oscillatoriophycideae (66.67%)
12 12050 bp 50.16 103.15 77.45
qh_1_scaffold_1189
Order: Oscillatoriales (50%)
10 8615 bp 47.28 94.43 77.66
qh_1_scaffold_1526
Order: Oscillatoriales (57.14%)
7 5853 bp 46.81 108.90 77.70
qh_1_scaffold_3571
Phylum: Cyanobacteria (100%)
9 3440 bp 50.84 104.94 77.88
qh_1_scaffold_297
Phylum: Cyanobacteria (75%)
24 23444 bp 49.26 110.19 78.01
qh_1_scaffold_618
Phylum: Cyanobacteria (74.19%)
31 27884 bp 48.41 105.08 78.06
qh_1_scaffold_1367
Class: Oscillatoriophycideae (55.56%)
9 6257 bp 47.90 114.00 78.10
qh_1_scaffold_12
Class: Oscillatoriophycideae (75.93%)
54 50680 bp 48.35 112.88 78.15
qh_1_scaffold_368
Order: Oscillatoriales (62.5%)
8 12484 bp 47.94 108.07 78.24
qh_1_scaffold_957
Phylum: Cyanobacteria (87.5%)
8 7738 bp 47.00 116.02 78.28
qh_1_scaffold_267
Phylum: Cyanobacteria (90.91%)
22 22949 bp 49.54 117.78 78.37
qh_1_scaffold_662
Domain: Bacteria (81.82%)
11 9507 bp 47.41 106.17 78.45
qh_1_scaffold_263
Class: Oscillatoriophycideae (66.67%)
18 15059 bp 47.61 112.54 78.45
qh_1_scaffold_459
Class: Oscillatoriophycideae (50%)
10 11471 bp 48.61 101.26 78.46
qh_1_scaffold_852
Phylum: Cyanobacteria (100%)
11 9877 bp 47.40 104.45 78.67
qh_1_scaffold_1066
Species: Pleurocapsa minor (50%)
6 7246 bp 48.56 111.03 78.75
qh_1_scaffold_5019
Order: Chroococcales (50%)
4 4318 bp 45.72 115.22 78.79
qh_1_scaffold_625
Order: Nostocales (60%)
5 9777 bp 49.87 97.63 78.80
qh_1_scaffold_1337
Class: Oscillatoriophycideae (57.14%)
7 6345 bp 46.59 115.90 78.87
qh_1_scaffold_58
Class: Oscillatoriophycideae (57.14%)
28 27236 bp 48.26 108.26 78.90
qh_1_scaffold_2278
Order: Nostocales (66.67%)
3 4532 bp 52.14 21.73 78.91
qh_1_scaffold_3029
Phylum: Cyanobacteria (50%)
6 3815 bp 48.99 109.75 79.19
qh_1_scaffold_687
Class: Oscillatoriophycideae (75%)
12 9342 bp 47.84 112.83 79.22
qh_1_scaffold_92
Order: Oscillatoriales (57.14%)
21 22977 bp 47.34 110.85 79.23
qh_1_scaffold_4096
Species: Coleofasciculus chthonoplastes (50%)
4 3185 bp 49.51 99.62 79.31
qh_1_scaffold_408
Phylum: Cyanobacteria (92%)
25 25024 bp 49.07 111.15 79.32
qh_1_scaffold_307
Class: Oscillatoriophycideae (60%)
10 13868 bp 49.83 110.85 79.35
qh_1_scaffold_1172
Phylum: Cyanobacteria (72.73%)
11 6875 bp 47.80 113.72 79.46
qh_1_scaffold_206
Phylum: Cyanobacteria (71.43%)
14 16900 bp 46.81 80.81 79.47
qh_1_scaffold_469
Class: Oscillatoriophycideae (64.29%)
28 27970 bp 48.32 110.87 79.51
qh_1_scaffold_520
Class: Oscillatoriophycideae (61.9%)
21 21376 bp 48.52 112.17 79.55
qh_1_scaffold_2656
Order: Oscillatoriales (50%)
8 6364 bp 48.65 117.88 79.57
qh_1_scaffold_1570
Species: Microcoleus sp. PCC 7113 (50%)
4 5752 bp 49.11 107.65 79.59
qh_1_scaffold_479
Order: Oscillatoriales (50%)
10 11240 bp 49.37 116.09 79.59
qh_1_scaffold_89
Phylum: Cyanobacteria (66.67%)
30 23535 bp 47.47 90.13 79.64
qh_1_scaffold_1778
Class: Oscillatoriophycideae (66.67%)
3 5281 bp 49.16 106.08 79.64
qh_1_scaffold_186
Phylum: Cyanobacteria (77.27%)
22 24679 bp 49.03 108.94 79.77
qh_1_scaffold_257
Class: Oscillatoriophycideae (57.14%)
14 15151 bp 47.32 111.06 79.82
qh_1_scaffold_537
Phylum: Cyanobacteria (85.71%)
7 10590 bp 49.04 105.84 79.83
qh_1_scaffold_128
Phylum: Cyanobacteria (88.89%)
18 22527 bp 48.23 111.46 79.86
qh_1_scaffold_1190
Class: Oscillatoriophycideae (60%)
5 6813 bp 49.45 100.94 79.92
qh_1_scaffold_16
Class: Oscillatoriophycideae (60%)
35 37165 bp 47.85 111.95 79.94
qh_1_scaffold_1132
Class: Oscillatoriophycideae (62.5%)
8 7005 bp 48.72 110.24 80.09
qh_1_scaffold_21
Class: Oscillatoriophycideae (66.67%)
51 51544 bp 48.20 97.01 80.14
Displaying items 101-150 of 273 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.