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QH_1_Oscillatoriophycideae_48_107

In projects: QH_1

Consensus taxonomy: Oscillatoriophycideae  →  Cyanobacteria  →  Bacteria

Taxonomy override: Cyanobacteria

Displaying items 151-200 of 273 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_1_scaffold_69
Order: Oscillatoriales (62.07%)
29 34617 bp 48.05 114.24 80.16
qh_1_scaffold_24
Class: Oscillatoriophycideae (74.36%)
39 40585 bp 48.75 108.38 80.22
qh_1_scaffold_1450
Phylum: Cyanobacteria (87.5%)
8 6035 bp 47.94 115.33 80.28
qh_1_scaffold_91
Class: Oscillatoriophycideae (60.87%)
23 22999 bp 47.53 113.24 80.40
qh_1_scaffold_0
Class: Oscillatoriophycideae (64.63%)
82 93024 bp 49.07 109.10 80.45
qh_1_scaffold_224
Order: Oscillatoriales (61.54%)
26 28447 bp 48.96 114.11 80.48
qh_1_scaffold_373
Order: Oscillatoriales (66.67%)
9 13885 bp 46.63 113.19 80.50
qh_1_scaffold_140
Phylum: Cyanobacteria (66.67%)
27 20138 bp 45.89 117.30 80.50
qh_1_scaffold_314
Class: Oscillatoriophycideae (55.17%)
29 27257 bp 47.57 114.35 80.54
qh_1_scaffold_1536
Phylum: Cyanobacteria (62.5%)
8 5834 bp 45.05 32.69 80.58
qh_1_scaffold_1759
Class: Oscillatoriophycideae (60%)
5 5310 bp 47.08 109.40 80.62
qh_1_scaffold_3975
Species: Halothece sp. PCC 7418 (100%)
1 3244 bp 49.51 107.68 80.73
qh_1_scaffold_679
Phylum: Cyanobacteria (86.67%)
15 17676 bp 48.83 108.52 80.75
qh_1_scaffold_196
Order: Oscillatoriales (52.94%)
17 17382 bp 47.65 114.38 80.76
qh_1_scaffold_95
Class: Oscillatoriophycideae (66.67%)
27 29304 bp 48.00 108.92 80.78
qh_1_scaffold_1036
Class: Oscillatoriophycideae (50%)
8 7383 bp 45.52 119.14 80.82
qh_1_scaffold_1880
Class: Oscillatoriophycideae (50%)
6 5085 bp 46.45 114.67 80.83
qh_1_scaffold_162
Class: Oscillatoriophycideae (67.74%)
31 30458 bp 48.39 101.25 80.84
qh_1_scaffold_344
Class: Oscillatoriophycideae (61.54%)
13 12961 bp 47.01 114.74 80.85
qh_1_scaffold_127
Class: Oscillatoriophycideae (76.19%)
21 23068 bp 48.86 106.69 80.94
qh_1_scaffold_746
Class: Oscillatoriophycideae (55%)
20 19864 bp 48.39 107.84 80.95
qh_1_scaffold_229
Phylum: Cyanobacteria (85.71%)
21 15849 bp 48.11 112.63 80.96
qh_1_scaffold_4246
Class: Oscillatoriophycideae (66.67%)
3 3111 bp 50.14 93.22 81.00
qh_1_scaffold_3668
Species: Stanieria cyanosphaera (57.14%)
7 6288 bp 44.82 109.16 81.01
qh_1_scaffold_586
Order: Oscillatoriales (50%)
10 10170 bp 49.19 106.65 81.09
qh_1_scaffold_504
Class: Oscillatoriophycideae (65%)
20 17840 bp 48.82 110.10 81.12
qh_1_scaffold_1498
Class: Oscillatoriophycideae (60%)
10 7438 bp 48.05 110.23 81.15
qh_1_scaffold_331
Phylum: Cyanobacteria (86.67%)
15 13253 bp 48.54 106.71 81.15
qh_1_scaffold_1308
Class: Oscillatoriophycideae (55%)
20 17624 bp 49.22 100.90 81.18
qh_1_scaffold_4180
Order: Oscillatoriales (57.14%)
7 6541 bp 44.92 109.62 81.18
qh_1_scaffold_1345
Class: Oscillatoriophycideae (57.14%)
7 6317 bp 47.67 111.24 81.30
qh_1_scaffold_1510
Order: Oscillatoriales (80%)
5 5887 bp 47.92 114.27 81.33
qh_1_scaffold_461
Phylum: Cyanobacteria (78.57%)
14 12446 bp 49.02 118.12 81.38
qh_1_scaffold_1323
Species: Microcoleus sp. PCC 7113 (50%)
6 6387 bp 49.87 107.91 81.40
qh_1_scaffold_482
Order: Oscillatoriales (80%)
10 11223 bp 49.16 105.11 81.42
qh_1_scaffold_22
Class: Oscillatoriophycideae (54.76%)
42 41364 bp 48.49 108.01 81.46
qh_1_scaffold_330
Class: Oscillatoriophycideae (66.67%)
36 27919 bp 48.70 107.78 81.56
qh_1_scaffold_32
Class: Oscillatoriophycideae (69.23%)
26 32073 bp 49.13 108.28 81.58
qh_1_scaffold_2049
Phylum: Cyanobacteria (100%)
5 4824 bp 44.28 123.88 81.59
qh_1_scaffold_585
Class: Oscillatoriophycideae (62.5%)
16 14771 bp 46.39 111.79 81.63
qh_1_scaffold_338
Class: Oscillatoriophycideae (80%)
15 13626 bp 47.53 103.70 81.66
qh_1_scaffold_193
Class: Oscillatoriophycideae (55.56%)
18 17503 bp 49.59 101.77 81.79
qh_1_scaffold_1714
Order: Oscillatoriales (50%)
6 5398 bp 48.59 104.50 81.86
qh_1_scaffold_630
Class: Oscillatoriophycideae (60%)
10 9732 bp 48.03 118.57 81.91
qh_1_scaffold_27
Class: Oscillatoriophycideae (62.07%)
29 33364 bp 48.31 109.95 81.91
qh_1_scaffold_1471
Class: Oscillatoriophycideae (60%)
5 5981 bp 45.04 120.45 82.01
qh_1_scaffold_1388
Class: Oscillatoriophycideae (62.5%)
8 6203 bp 50.01 104.21 82.22
qh_1_scaffold_1576
Order: Chroococcales (60%)
5 5743 bp 47.45 116.72 82.22
qh_1_scaffold_347
Class: Oscillatoriophycideae (53.33%)
15 13330 bp 48.37 109.24 82.26
qh_1_scaffold_2387
Domain: Bacteria (80%)
5 4413 bp 46.48 114.66 82.33
Displaying items 151-200 of 273 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.