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qh_1_scaffold_1732

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_1732_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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105..329
DNA (225bp) protein (75aa)
cold shock protein id=24646106 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Cold-shock DNA-binding protein family {ECO:0000313|EMBL:ERH10285.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
cold-shock DNA-binding domain protein
qh_1_scaffold_1732_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(485..1228)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWN5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ26862.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_1_scaffold_1732_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1284..1766)
DNA (483bp) protein (161aa)
hypothetical protein id=24648661 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH09796.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qh_1_scaffold_1732_4
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2044..2883
DNA (840bp) protein (280aa)
Lipoate-protein ligase A n=1 Tax=halophilic archaeon J07HX64 RepID=U1PLN6_9EURY
Lipoate-protein ligase A {ECO:0000313|EMBL:ERH11044.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
biotin/lipoate A/B protein ligase
qh_1_scaffold_1732_5
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2939..3805
DNA (867bp) protein (289aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMA
Probable endonuclease 4 n=2 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JIN8_NATP1
apurinic endonuclease APN1
qh_1_scaffold_1732_6
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3871..4656
DNA (786bp) protein (262aa)
Glucose dehydrogenase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LN76_HALJP
oxidoreductase
Glucose dehydrogenase {ECO:0000313|EMBL:EMA34543.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131.
qh_1_scaffold_1732_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4610..5230)
DNA (621bp) protein (207aa)
Glutamine amidotransferase of anthranilate synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CVZ3_9EURY
Glutamine amidotransferase of anthranilate synthase {ECO:0000313|EMBL:ELZ27411.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source=
glutamine amidotransferase of anthranilate synthase
qh_1_scaffold_1732_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5227..7188)
DNA (1962bp) protein (654aa)
trpE1; anthranilate synthase component I (EC:4.1.3.27)
Para-aminobenzoate synthase component I n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K1F5_9EURY
Para-aminobenzoate synthase component I {ECO:0000313|EMBL:ELZ27410.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex
qh_1_scaffold_1732_9
unknown

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7427..7984
DNA (558bp) protein (186aa)

This feature has no annotations

qh_1_scaffold_1732_10
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8036..8611)
DNA (576bp) protein (192aa)
gcvT5; aminomethyltransferase (EC:2.1.2.10)
Aminomethyltransferase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N263_9EURY
Aminomethyltransferase {ECO:0000313|EMBL:EMA51224.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM
qh_1_scaffold_1732_11
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(8613..9326)
DNA (714bp) protein (238aa)
Glycine cleavage system protein T n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X9M5_9EURY
Glycine cleavage system protein T {ECO:0000313|EMBL:ELY58131.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylol
glycine cleavage system T protein (aminomethyltransferase)
qh_1_scaffold_1732_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9686..10528)
DNA (843bp) protein (281aa)
5,10-methylenetetrahydrofolate reductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MT00_9EURY
5,10-methylenetetrahydrofolate reductase {ECO:0000313|EMBL:EMA48867.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
methylenetetrahydrofolate reductase
qh_1_scaffold_1732_13
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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10776..11669
DNA (894bp) protein (298aa)
methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9)
Bifunctional protein FolD n=1 Tax=Halonotius sp. J07HN4 RepID=U1P949_9EURY
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
qh_1_scaffold_1732_14

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11892..13256
DNA (1365bp) protein (455aa)
Glycerate 2-kinase {ECO:0000313|EMBL:ESS07361.1}; EC=2.7.1.165 {ECO:0000313|EMBL:ESS07361.1};; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
Glycerate 2-kinase n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y3Y5_9ARCH
putative glycerate kinase
Displaying 14 items

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