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qh_1_scaffold_2431

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_2431_1
unknown

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comp(1..63)
DNA (63bp) protein (21aa)

This feature has no annotations

qh_1_scaffold_2431_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(94..888)
DNA (795bp) protein (265aa)
hypothetical protein id=24645795 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH10014.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qh_1_scaffold_2431_3
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(885..1550)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4V8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52149.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qh_1_scaffold_2431_4
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1550..1750)
DNA (201bp) protein (67aa)
tfeA; transcription initiation factor IIE alpha subunit; K03136 transcription initiation factor TFIIE subunit alpha id=24648879 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Transcription initiation factor IIE, alpha subunit {ECO:0000313|EMBL:ERH10012.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
transcription factor
qh_1_scaffold_2431_5
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1725..2024)
DNA (300bp) protein (100aa)
Transcription factor E n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KNC2_9EURY
transcription factor
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Tr
qh_1_scaffold_2431_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2192..2728)
DNA (537bp) protein (179aa)
tRNA (cytidine(56)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00077}; EC=2.1.1.206 {ECO:0000256|HAMAP-Rule:MF_00077};; tRNA ribose 2'-O-methyltransferase aTrm56 {ECO:0000256|HAMAP-Rule:MF_0007
tRNA (cytidine(56)-2'-O)-methyltransferase n=1 Tax=halophilic archaeon J07HX64 RepID=U1QUS9_9EURY
hypothetical protein
qh_1_scaffold_2431_7
unknown

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comp(2737..2892)
DNA (156bp) protein (52aa)

This feature has no annotations

qh_1_scaffold_2431_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3029..4297
DNA (1269bp) protein (423aa)
Replication factor A n=1 Tax=halophilic archaeon J07HX64 RepID=U1PGB7_9EURY
Replication factor A {ECO:0000313|EMBL:ERH09134.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
OB-fold tRNA/helicase-type nucleic acid binding-protein
qh_1_scaffold_2431_9
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4294..5481
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AD72_NATGS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ71853.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium gregoryi (s
qh_1_scaffold_2431_10

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5481..5645
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CTZ8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESS06910.1}; Flags: Fragment;; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
qh_1_scaffold_2431_11
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5645..6199
DNA (555bp) protein (185aa)
Putative ICC-like phosphoesterase n=1 Tax=halophilic archaeon J07HX5 RepID=U1MGZ5_9EURY
Putative ICC-like phosphoesterase {ECO:0000313|EMBL:ERG88529.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
yhcR1; phosphoesterase
qh_1_scaffold_2431_12
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6348..6842)
DNA (495bp) protein (165aa)
cyclase/dehydrase id=24648349 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH09481.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
cyclase/dehydrase
qh_1_scaffold_2431_13
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6925..7599)
DNA (675bp) protein (225aa)
gdhA2; NAD(P)-specific glutamate dehydrogenase (EC:1.4.1.3)
Glutamate dehydrogenase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KRW2_9EURY
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JC
qh_1_scaffold_2431_14
unknown

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8199..8693
DNA (495bp) protein (165aa)

This feature has no annotations

qh_1_scaffold_2431_15
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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8751..9614
DNA (864bp) protein (288aa)
short chain dehydrogenase (EC:1.1.1.-)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VTH0_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ELY40454.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum
Displaying 15 items

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