ggKbase home page

qh_1_scaffold_3028

Search features with annotation key words

Displaying 13 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_3028_1
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(260..484)
DNA (225bp) protein (75aa)
Cold shock protein n=2 Tax=Halobacteriaceae RepID=L0JPR4_NATP1
cold shock protein
Cold-shock DNA-binding domain-containing protein {ECO:0000313|EMBL:ELZ14040.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Halot
qh_1_scaffold_3028_2
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(529..1914)
DNA (1386bp) protein (462aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IG31_9EURY
Cobalt transporter {ECO:0000313|EMBL:AHG04529.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
qh_1_scaffold_3028_3
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2041..2883)
DNA (843bp) protein (281aa)
Uncharacterized protein n=2 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=L9V8K9_NATMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG00023.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
qh_1_scaffold_3028_4
unknown

Not on your lists

3089..3559
DNA (471bp) protein (157aa)

This feature has no annotations

qh_1_scaffold_3028_5
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3537..4904)
DNA (1368bp) protein (456aa)
Blue copper domain protein n=2 Tax=Halococcus hamelinensis RepID=M0LQT1_9EURY
Blue copper domain protein {ECO:0000313|EMBL:EMA35846.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis
glucose/sorbosone dehydrogenase
qh_1_scaffold_3028_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5045..5908)
DNA (864bp) protein (288aa)
galE_1; nucleoside-diphosphate-sugar epimerase 1 ( UDP-glucose 4-epimerase ) (EC:5.1.3.2)
NAD-dependent epimerase/dehydratase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IN82_NATPD
GalE family epimerase/dehydratase {ECO:0000313|EMBL:CAI50422.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pha
qh_1_scaffold_3028_7
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6059..6883)
DNA (825bp) protein (275aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006, ECO:0000313|EMBL:ELZ21163.1}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rul
Undecaprenyl-diphosphatase n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CEU3_9EURY
Undecaprenyl-diphosphatase
qh_1_scaffold_3028_8
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6988..8055
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9W851_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY45695.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sulfidifaciens J
hypothetical protein
qh_1_scaffold_3028_9
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8163..8372
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=S6CTJ6_9EURY
hypothetical protein (DUF4330)
Uncharacterized protein {ECO:0000313|EMBL:CCQ32997.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
qh_1_scaffold_3028_10
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8369..9244
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L4Z7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA28183.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
hypothetical protein
qh_1_scaffold_3028_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9294..10676
DNA (1383bp) protein (461aa)
seryl-tRNA synthetase (EC:6.1.1.11) id=24648160 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
seryl-tRNA synthetase (EC:6.1.1.11)
qh_1_scaffold_3028_12
unknown

Not on your lists

10716..10949
DNA (234bp) protein (78aa)

This feature has no annotations

qh_1_scaffold_3028_13
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11030..11710
DNA (681bp) protein (227aa)
hypothetical protein id=24647787 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Putative exonuclease {ECO:0000313|EMBL:ERH08915.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
Displaying 13 items

View Taxonomy