ggKbase home page

qh_1_scaffold_3101

Search features with annotation key words

Displaying 12 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_3101_1
unknown

Not on your lists

2..166
DNA (165bp) protein (55aa)

This feature has no annotations

qh_1_scaffold_3101_2
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

560..796
DNA (237bp) protein (79aa)
Transposase n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0BZ36_9EURY
Transposase {ECO:0000313|EMBL:ELZ15678.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 13563.;"
tnp; transposase
qh_1_scaffold_3101_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1246..2631)
DNA (1386bp) protein (462aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
Adenylosuccinate lyase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CK10_9EURY
adenylosuccinate lyase
qh_1_scaffold_3101_4
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2773..3225
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Haloarcula hispanica N601 RepID=V5TNB3_HALHI
hypothetical protein
UPF0179 protein HISP_08555 {ECO:0000256|HAMAP-Rule:MF_00498}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica
qh_1_scaffold_3101_5
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3084..3545)
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZ79_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW90000.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
qh_1_scaffold_3101_6
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3639..3971)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0K185_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB38124.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
qh_1_scaffold_3101_7
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4059..4787)
DNA (729bp) protein (243aa)
UspA domain protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LSI5_HALLT
UspA domain protein
UspA domain protein {ECO:0000313|EMBL:ACM57932.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain ATC
qh_1_scaffold_3101_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4873..5556)
DNA (684bp) protein (228aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1085028 species=
endonuclease III (EC:4.2.99.18)
endonuclease III n=1 Tax=Halorubrum sp. T3 RepID=UPI00035C304B
qh_1_scaffold_3101_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5646..6383)
DNA (738bp) protein (246aa)
Putative transcriptional regulator n=1 Tax=halophilic archaeon J07HX64 RepID=U1QRV7_9EURY
Putative transcriptional regulator {ECO:0000313|EMBL:ERH09918.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
putative transcriptional regulator
qh_1_scaffold_3101_10
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6654..7580
DNA (927bp) protein (309aa)
galE1; nucleoside-diphosphate-sugar epimerase ( UDP-glucose 4-epimerase) (EC:5.1.3.2)
NAD-dependent epimerase/dehydratase n=2 Tax=Halobacterium salinarum RepID=B0R431_HALS3
UDP-glucose 4-epimerase {ECO:0000313|EMBL:AAG19227.1}; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (s
qh_1_scaffold_3101_11
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7603..8211)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9X6G6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY57011.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
qh_1_scaffold_3101_12
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8271..8852)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9X6G6_9EURY
transporter
Transporter {ECO:0000313|EMBL:AHF98501.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.;"
Displaying 12 items

View Taxonomy