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qh_1_scaffold_550

Search features with annotation key words

Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_550_1
unknown

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comp(1..117)
DNA (117bp) protein (39aa)

This feature has no annotations

qh_1_scaffold_550_2
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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303..566
DNA (264bp) protein (88aa)
Regulator of stationary/sporulation gene expression n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JTJ3_NATP1
regulator of stationary/sporulation gene expression
Regulator of stationary/sporulation gene expression {ECO:0000313|EMBL:AGB33721.1}; Transcription regulator {ECO:0000313|EMBL:ELY76546.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Na
qh_1_scaffold_550_3
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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747..1379
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI000377DFB8
TetR family transcriptional regulator {ECO:0000313|EMBL:ELZ48665.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum corien
TetR family transcriptional regulator
qh_1_scaffold_550_4
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1509..3083
DNA (1575bp) protein (525aa)
MATE efflux family protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0MBI7_9EURY
MATE efflux family protein {ECO:0000313|EMBL:EMA41770.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens J
MATE efflux family protein
qh_1_scaffold_550_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3029..3412
DNA (384bp) protein (128aa)
ABC-type multidrug transport system, ATPase component id=24648862 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:ERH09995.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64
qh_1_scaffold_550_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3428..4639)
DNA (1212bp) protein (404aa)
sufD; FeS assembly ATPase SufD; K09015 Fe-S cluster assembly protein SufD id=24647635 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Iron-regulated ABC transporter permease protein SufD {ECO:0000313|EMBL:ERH08769.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.
SufBD protein
qh_1_scaffold_550_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4642..6072)
DNA (1431bp) protein (477aa)
FeS assembly protein SufB n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CP97_9EURY
FeS assembly protein SufB {ECO:0000313|EMBL:ELZ25046.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
sufB_3; Fe-S cluster assembly protein ABC transporter permease
qh_1_scaffold_550_8
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6082..6984)
DNA (903bp) protein (301aa)
FeS assembly ATPase SufC n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LMQ5_HALJP
FeS assembly ATPase SufC {ECO:0000313|EMBL:EMA33744.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 61
yurF; ABC transporter ATP-binding protein
qh_1_scaffold_550_9
Ateline herpesvirus 3, Rhadinovirus, Herpesvirales, Viruses

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7432..8139
DNA (708bp) protein (236aa)
Orf 73 {ECO:0000313|EMBL:AAC95598.1}; TaxID=85618 species="Viruses; dsDNA viruses, no RNA stage; Herpesvirales; Herpesviridae; Gammaherpesvirinae; Rhadinovirus.;" source="Ateline herpesvirus 3 (AtHV-3
qh_1_scaffold_550_10
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8170..9486)
DNA (1317bp) protein (439aa)
Peptide ABC transporter ATPase n=1 Tax=Natronorubrum tibetense GA33 RepID=L9W159_9EURY
Peptide ABC transporter ATPase {ECO:0000313|EMBL:ELY43011.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense
oligopeptide ABC transporter ATPase
qh_1_scaffold_550_11
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(9479..10480)
DNA (1002bp) protein (334aa)
Oligopeptide/dipeptide ABC transporter ATPase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FMZ6_9EURY
Oligopeptide/dipeptide ABC transporter ATPase {ECO:0000313|EMBL:ELZ59959.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubru
dppD3; dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein
qh_1_scaffold_550_12
unknown

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comp(10786..11697)
DNA (912bp) protein (304aa)

This feature has no annotations

qh_1_scaffold_550_13
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11809..12813
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI000377AF9F
ABC transporter permease {ECO:0000313|EMBL:ELY43008.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.
dppB6; putative dipeptides/oligopeptides ABC transporter permease
qh_1_scaffold_550_14
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12886..13377)
DNA (492bp) protein (164aa)
DNA polymerase {ECO:0000256|RuleBase:RU000442}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU000442};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon
DNA polymerase n=1 Tax=halophilic archaeon J07HX64 RepID=U1QRZ0_9EURY
DNA polymerase B exonuclease
Displaying 14 items

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