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qh_1_scaffold_2273

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_2273_1
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1..366
DNA (366bp) protein (122aa)
Radical SAM protein n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0ASD1_9EURY
Radical SAM protein {ECO:0000313|EMBL:ELZ01445.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoensis JCM 10990.;"
radical SAM domain-containing protein
qh_1_scaffold_2273_2
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(594..1880)
DNA (1287bp) protein (429aa)
Pyrrolo-quinoline quinone n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y865_9EURY
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:ELY70239.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;
qh_1_scaffold_2273_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1963..2250
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY11_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27493.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_1_scaffold_2273_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2352..2837
DNA (486bp) protein (162aa)
Deoxyribonuclease/rho domain-containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D047_9EURY
Deoxyribonuclease/rho domain-containing protein {ECO:0000313|EMBL:ELZ27494.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Hal
deoxyribonuclease/rho motif-related TRAM
qh_1_scaffold_2273_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2928..3713
DNA (786bp) protein (262aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWB5_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ELZ27496.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex
short-chain dehydrogenase/reductase SDR
qh_1_scaffold_2273_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3816..4886)
DNA (1071bp) protein (357aa)
Mannose-1-phosphate guanylyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWB9_9EURY
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:ELZ27501.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex
manC; mannose-1-phosphate guanylyltransferase
qh_1_scaffold_2273_7
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5034..5390
DNA (357bp) protein (119aa)
MarR domain containing protein n=1 Tax=Halorhabdus tiamatea SARL4B PF43_9EURY">RepID=F7PF43_9EURY
sugar-specific transcriptional regulator, TrmB family
MarR domain containing protein {ECO:0000313|EMBL:ERJ06033.1}; Sugar-specific transcriptional regulator, TrmB family {ECO:0000313|EMBL:CCQ34406.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Haloba
qh_1_scaffold_2273_8
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5391..5720
DNA (330bp) protein (110aa)
hypothetical protein id=24642063 bin=halophilic_archaeon_J07HB67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HB67
PemK-like protein {ECO:0000313|EMBL:ERH12050.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
hypothetical protein
qh_1_scaffold_2273_9
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5859..6119
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EI29_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ46527.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
qh_1_scaffold_2273_10
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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6457..7131
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI00023754B8
Uncharacterized protein {ECO:0000313|EMBL:ETX03812.1}; Flags: Fragment;; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
hypothetical protein
qh_1_scaffold_2273_11
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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comp(7120..8415)
DNA (1296bp) protein (432aa)
major facilitator superfamily protein id=24505192 bin=RBG_19FT_COMBO_GAL15_69_19 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
major facilitator superfamily protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
multidrug resistance protein
qh_1_scaffold_2273_12
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8419..9189)
DNA (771bp) protein (257aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF28020.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
methylase id=24643851 bin=halophilic_archaeon_J07HB67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HB67
qh_1_scaffold_2273_13
unknown

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comp(9373..9618)
DNA (246bp) protein (82aa)

This feature has no annotations

qh_1_scaffold_2273_14
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9647..9967
DNA (321bp) protein (107aa)
Nucleic acid binding OB-fold tRNA/helicase-type n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQ59_HALUD
replication factor A
Nucleic acid binding OB-fold tRNA/helicase-type {ECO:0000313|EMBL:ACV11803.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Hal
Displaying 14 items

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