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qh_1_scaffold_2294

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_2294_1
Halorubrum_J07HR59, Halorubrum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..887)
DNA (885bp) protein (295aa)
id=24636477 bin=Halorubrum_J07HR59 tax=Halorubrum_J07HR59
id=24636477 bin=Halorubrum_J07HR59 tax=Halorubrum_J07HR59
qh_1_scaffold_2294_2
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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913..1185
DNA (273bp) protein (91aa)
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=543526 species="Archaea; Eur
Histidine--tRNA ligase n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RQH4_HALTV
qh_1_scaffold_2294_3
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1501..1845)
DNA (345bp) protein (115aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0A5S3_9EURY
hypothetical PIN domain protein
qh_1_scaffold_2294_4
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1875..2108)
DNA (234bp) protein (78aa)
Conserved domain protein {ECO:0000313|EMBL:AEB67126.1}; TaxID=990316 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta concili
hypothetical protein
qh_1_scaffold_2294_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2226..3062
DNA (837bp) protein (279aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4C8_9EURY
pseudouridylate synthase
qh_1_scaffold_2294_6
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3188..3685)
DNA (498bp) protein (166aa)
Uncharacterized protein n=2 Tax=Haloarcula RepID=Q5UY31_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA15288.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
qh_1_scaffold_2294_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3869..4021
DNA (153bp) protein (51aa)
50S ribosomal protein L39e n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D296_9EURY
50S ribosomal protein L39e {ECO:0000256|HAMAP-Rule:MF_00629}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
50S ribosomal protein L39e
qh_1_scaffold_2294_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4018..4296
DNA (279bp) protein (93aa)
50S ribosomal protein L31e n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2F6_9EURY
50S ribosomal protein L31e {ECO:0000256|HAMAP-Rule:MF_00410}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
ribosomal protein L31E
qh_1_scaffold_2294_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4299..4964
DNA (666bp) protein (222aa)
Translation initiation factor 6 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D656_9EURY
Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032}; Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
translation initiation factor IF-6
qh_1_scaffold_2294_10
unknown

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comp(4993..5166)
DNA (174bp) protein (58aa)

This feature has no annotations

Displaying 10 items

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