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qh_1_scaffold_1300_14

Organism: QH_1_Halobacteriales_68_42

partial RP 20 / 55 MC: 3 BSCG 15 / 51 MC: 2 ASCG 30 / 38 MC: 4
Location: comp(10317..11456)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 379.0
  • Bit_score: 596
  • Evalue 2.10e-167
rpoA'; DNA-directed RNA polymerase subunit A' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 379.0
  • Bit_score: 585
  • Evalue 1.30e-164
DNA-directed RNA polymerase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CGM0_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 379.0
  • Bit_score: 596
  • Evalue 2.60e-167

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Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1140
TTGCGCGCGACGCGCACCGACGAACTGCCCGACCCGGACGGTGTCGACGACGACGACCGGGCGTTCTGGACCGGCCGCACGCTGTTCTCCGAGCTGCTGCCCGACGACCTGGACCTGGAGTTCACGTCCTCGGCCGGCGACACGGTCCTCATCGAGGACGGCAAACTGCTCTCGGGGACCATCGACGAGGACGCGGTCGGGGCCTTCGGCGGCGAGGTGGTCGACACCATCGCGAAGAAGTACTCCAAGACGCGGGCCCGGATCTTCATCAACGAGGTCGCCGCGCTGGCGATGCGCTCGATCATGCACTTCGGGTTCTCGATCGGGATCGACGACGAGTCCATTCCGCCCGAGGCACAGGAGCGCATCGACGAGGCGATCGACAACGCCAACGACCGCATCGAGGAACTCATCGCGGCCTACGAGGCCGGCGAACTCGAACCGCTGCCGGGTCGTGACCTCTCGGAGACGCTGGAGATGCGCATCCAGCAACGGCAGGGCCGGGTGCGCGACACGGCGGGCGAAGTCGCCGAGGAGTACCTCGGCAAGGACAACCCGGCGGTCGTGATGGCCCAGTCCGGCGCCCGGGGGTCGATGCTCAACCTCACGCAGATGGCCGGCTGTATCGGCGGCCAGTACGTCCGCGGCGAGCGCATCCACCGCGGCTACGAGAACCGGACGCTGAGCCACTTCGAGGAGGGCGACCTGACGGCGGAGGCCCACGGGTTCGTCGAGCACTCCTACCGGAGCGGGCTGGACCCCAAGGAGTTCTTCTTCCACGCGATGGGCGGCCGCGAGGGGCTGGTCGACACCGCGGTCCGCACCTCGAAGTCCGGCTACCTGCAGCGCCGGCTCATCAACGCCCTCTCCGAACTCGAAGCGCAGTACGACGGCACCGTCCGGGACACCACGGACAACGTCGTCCAGTTCGAGTTCGGCGAGGACGGCACCTCGCCGGTGGAGGTTTCCTCCAGCGTGGACGAGTCCGCCGTCGACGTCGAGGAGATCGCCGACCGCGTCGTCGACGCCGAGTTCGACGACGACGAGGAGAAAGCCCAGTTTATCGGCGGCGAGCGAGAGCCGCTGAACCTCTCTGAGCACGCAGACGACTGGTGGATGGAAGCGGCGGGTGGTGACTGA
PROTEIN sequence
Length: 380
LRATRTDELPDPDGVDDDDRAFWTGRTLFSELLPDDLDLEFTSSAGDTVLIEDGKLLSGTIDEDAVGAFGGEVVDTIAKKYSKTRARIFINEVAALAMRSIMHFGFSIGIDDESIPPEAQERIDEAIDNANDRIEELIAAYEAGELEPLPGRDLSETLEMRIQQRQGRVRDTAGEVAEEYLGKDNPAVVMAQSGARGSMLNLTQMAGCIGGQYVRGERIHRGYENRTLSHFEEGDLTAEAHGFVEHSYRSGLDPKEFFFHAMGGREGLVDTAVRTSKSGYLQRRLINALSELEAQYDGTVRDTTDNVVQFEFGEDGTSPVEVSSSVDESAVDVEEIADRVVDAEFDDDEEKAQFIGGEREPLNLSEHADDWWMEAAGGD*