ggKbase home page

qh_1_scaffold_1300

Search features with annotation key words

Displaying 14 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_1300_1
unknown

Not on your lists

1..75
DNA (75bp) protein (25aa)

This feature has no annotations

qh_1_scaffold_1300_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(94..1524)
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CJ83_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22422.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
glucose/sorbosone dehydrogenase
qh_1_scaffold_1300_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1537..2292)
DNA (756bp) protein (252aa)
Cobalt transport protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIG0_9EURY
Cobalt transport protein {ECO:0000313|EMBL:ELZ22423.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2
cbiQ2; cobalt transport protein
qh_1_scaffold_1300_4
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2286..2990)
DNA (705bp) protein (235aa)
Cobalt ABC transporter ATP-binding protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KYI3_9EURY
Cobalt ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA25284.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcu
ABC transporter ATP-binding protein
qh_1_scaffold_1300_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2987..3574)
DNA (588bp) protein (196aa)
BioY protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CGL2_9EURY
BioY protein {ECO:0000313|EMBL:ELZ22425.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
dethiobiotin synthase
qh_1_scaffold_1300_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(3820..4338)
DNA (519bp) protein (173aa)
30S ribosomal protein S7 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CKN1_9EURY
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
30S ribosomal protein S7P
qh_1_scaffold_1300_7
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(4340..4768)
DNA (429bp) protein (143aa)
30S ribosomal protein S12 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QTQ4_9EURY
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.
rps12P; 30S ribosomal protein S12
qh_1_scaffold_1300_8
unknown

Not on your lists

4787..5092
DNA (306bp) protein (102aa)

This feature has no annotations

qh_1_scaffold_1300_9
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5284..5673
DNA (390bp) protein (130aa)
PilT protein domain protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NM81_HALUD
PilT protein domain protein
PilT protein domain protein {ECO:0000313|EMBL:ACV11289.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (
qh_1_scaffold_1300_10
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5760..6089
DNA (330bp) protein (110aa)
Putative multicopper oxidase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W4B2_9EURY
putative multicopper oxidase
Putative multicopper oxidase {ECO:0000313|EMBL:AGN01022.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-
qh_1_scaffold_1300_11
unknown

Not on your lists

comp(6168..7106)
DNA (939bp) protein (313aa)

This feature has no annotations

qh_1_scaffold_1300_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7209..7643)
DNA (435bp) protein (145aa)
Transcription elongation factor NusA-like protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIH0_9EURY
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source=
transcription elongation factor NusA
qh_1_scaffold_1300_13
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7651..10314)
DNA (2664bp) protein (888aa)
RNA polymerase Rpb1 domain 5 n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTX7_HALUD
RNA polymerase Rpb1 domain 5
RNA polymerase Rpb1 domain 5 {ECO:0000313|EMBL:ACV10966.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis
qh_1_scaffold_1300_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10317..11456)
DNA (1140bp) protein (380aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
rpoA'; DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
DNA-directed RNA polymerase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CGM0_9EURY
Displaying 14 items

View Taxonomy