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qh_1_scaffold_2898_6

Organism: QH_1_Halobacteriales_69_12

partial RP 13 / 55 MC: 1 BSCG 15 / 51 MC: 1 ASCG 22 / 38
Location: comp(4196..5623)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; H similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 475.0
  • Bit_score: 775
  • Evalue 3.20e-221
tRNA-splicing ligase RtcB n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CMZ0_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 475.0
  • Bit_score: 775
  • Evalue 2.30e-221
rtcB_1; RtcB-like protein 1 similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 475.0
  • Bit_score: 750
  • Evalue 3.80e-214

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Taxonomy

Halosimplex carlsbadense → Halosimplex → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1428
ATGGGCGTCCCGGCCCGCGTACTGGCCAGCGAGCCGCTGCTGGAGGAGATTGTCGGGGACAGGACCCTCGAGCAGTTGCGAAACACCACCCACCTCCCCGGCATCCGGAAGTACGCCGTCTGCATGCCCGACGGCCACCAGGGATACGGATTCCCCGTCGGCGGCGTCGCGGGTATCGACGCCGAAAACGGCTGTATAAGCCCTGGAGCGGTCGGTTACGACATTAACTGCGGCGTCAGGATGGTGAAATCAAATCTGAAGTACGATGAAATAAAGGGACGCGAGGCGGAACTGGTCGACGCGCTGTTCGAGGCCGTCCCGACCGGCCTGGGCGGCGGCGGTGTCCACGAGGGGTCGGGCGGTGACGTCGAGGCCATCCTCGAACGGGGGATGGGCTGGGCGCTGGAGGAAGGCTATGCCGTCCAGGACGACCTCGCCCACTGCGAGGACGAGGGTCGCCGCCCCGAGGGCGACGCGAGCGTGGTCTCGAAGAAGGCCACGGACCGCGGGCGCAACCAGATTGGGTCGCTGGGCTCGGGCAACCACTTCCTCGAGGTCCAGCGGGTCACCGACGTCTACCGCGGGGACGTCGCCAGCGAGTTCGGCCTCCGCGAGGACCAGGTGGTGGTGCTCATCCACTGTGGCTCGCGAGGCCTCGGCCACCAGACCTGTACGGACTACCTGCGGGACATCGAGCAGACCCACCAGGGGCTGCTCTCGGGGTTGCCCGACAAGGAACTGGCCGCGGCGCCCGCTGGCTCCCAGCTGGCCGACCAGTACTACCGGGCGATGTGTGGCGCCATCAACTACGCCTGGGTGAACCGCCAGCTCATCACCCACGCCACCCGGCAGGTGTTCGCCGACGTCTTCGGCACCTCGTGGGAGGACCTGGGCATGGACCTGCTGTACGACGTCGCCCACAACATCGCGAAGAAGGAGGTCCACGAGGTCGGGGTCGGTCCGGCGGGGCAACCAGCGGGAGGCGGCGACGCCGCCGCCCGCGAGGACCGGGAGCTGTACGTCCACCGGAAAGGTGCGACCCGGGCGTTCCCGGCCGGCCGTCCCGAACTGCCGCCCGCCTACCGGGACGTCGGCCAGCCGGTCATCATCCCCGGCAGCATGGGGGCCGGGAGCTACGTGCTCCGTGGGGGCGAGCAGTCACTGGCGGAGACGTTCGGCTCGACGGCCCACGGCGCCGGTCGGCTGATGAGCCGCACCCAGGCGAAAGACGAGTTCTGGGGCGAGGACGTCCGCGACGAACTGCGCGAGCAGAACCAAGTGTACGTCAAGGCCCAGAGCGGGGCCACCGTCGCCGAGGAGGCCCCCGGGGTGTACAAGGACGTCGACGAGGTGGTCCGGGTCTCGGACGCGCTGGGTATCGGGGACCGCGTGGCCCGCACCTACCCGGTCTGTAACATCAAGGGCTGA
PROTEIN sequence
Length: 476
MGVPARVLASEPLLEEIVGDRTLEQLRNTTHLPGIRKYAVCMPDGHQGYGFPVGGVAGIDAENGCISPGAVGYDINCGVRMVKSNLKYDEIKGREAELVDALFEAVPTGLGGGGVHEGSGGDVEAILERGMGWALEEGYAVQDDLAHCEDEGRRPEGDASVVSKKATDRGRNQIGSLGSGNHFLEVQRVTDVYRGDVASEFGLREDQVVVLIHCGSRGLGHQTCTDYLRDIEQTHQGLLSGLPDKELAAAPAGSQLADQYYRAMCGAINYAWVNRQLITHATRQVFADVFGTSWEDLGMDLLYDVAHNIAKKEVHEVGVGPAGQPAGGGDAAAREDRELYVHRKGATRAFPAGRPELPPAYRDVGQPVIIPGSMGAGSYVLRGGEQSLAETFGSTAHGAGRLMSRTQAKDEFWGEDVRDELREQNQVYVKAQSGATVAEEAPGVYKDVDEVVRVSDALGIGDRVARTYPVCNIKG*