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qh_1_scaffold_878

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_878_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..345
DNA (345bp) protein (115aa)
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000255|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000255|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000255|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=GATB_NATPD
qh_1_scaffold_878_2
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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348..839
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NMN2_HALBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ66187.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
qh_1_scaffold_878_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(860..2212)
DNA (1353bp) protein (451aa)
Oligopeptide/dipeptide ABC transporter ATPase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI56_9EURY
Oligopeptide/dipeptide ABC transporter ATPase {ECO:0000313|EMBL:EMA45003.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloc
oligopeptide/dipeptide ABC transporter ATP-binding protein
qh_1_scaffold_878_4
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2209..3345)
DNA (1137bp) protein (379aa)
Oligopeptide/dipeptide ABC transporter ATPase n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PA47_9EURY
Oligopeptide/dipeptide ABC transporter ATPase {ECO:0000313|EMBL:EMA65700.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubru
oligopeptide/dipeptide ABC transporter ATP-binding protein
qh_1_scaffold_878_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3342..4370)
DNA (1029bp) protein (343aa)
Binding-protein-dependent transporters inner membrane component n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N730_9EURY
Binding-protein-dependent transporters inner membrane component {ECO:0000313|EMBL:EMA53671.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcu
dipeptide/oligopeptide/nickel ABC transporter permease
qh_1_scaffold_878_6
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4372..5448)
DNA (1077bp) protein (359aa)
Dipeptide/oligopeptide/nickel ABC transporter permease n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DDS5_9EURY
Dipeptide/oligopeptide/nickel ABC transporter permease {ECO:0000313|EMBL:ELZ33636.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" sou
dipeptide/oligopeptide/nickel ABC transporter permease
qh_1_scaffold_878_7
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5553..7265)
DNA (1713bp) protein (571aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NMN7_HALBP
peptide ABC transporter substrate-binding protein
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:ADQ66192.1}; Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:ELY27313.1}; Flags: Precursor;; TaxID=4693
qh_1_scaffold_878_8
unknown

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comp(7769..8080)
DNA (312bp) protein (104aa)

This feature has no annotations

qh_1_scaffold_878_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8424..9851
DNA (1428bp) protein (476aa)
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=348780 species="Archaea; Euryarchaeo
DNA topoisomerase 1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT32_NATPD
Displaying 9 items

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