ggKbase home page

qh_1_scaffold_6140

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_6140_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


482..775
DNA (294bp) protein (98aa)
50S ribosomal protein L21e n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RL21_NATPD
rpl21R; 50S ribosomal protein L21e
50S ribosomal protein L21e {ECO:0000255|HAMAP-Rule:MF_00369}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharao
qh_1_scaffold_6140_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

772..1128
DNA (357bp) protein (119aa)
rpoF; DNA-directed RNA polymerase subunit F (EC:2.7.7.6)
DNA-directed RNA polymerase subunit F {ECO:0000313|EMBL:CAI49932.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CAI49932.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
DNA-directed RNA polymerase subunit F n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPL8_NATPD
qh_1_scaffold_6140_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1305..1880
DNA (576bp) protein (192aa)
Putative tRNA-specific adenosine deaminase {ECO:0000313|EMBL:CAI49931.1}; EC=3.5.4.- {ECO:0000313|EMBL:CAI49931.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Haloba
Putative tRNA-specific adenosine deaminase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPL9_NATPD
hypothetical protein
qh_1_scaffold_6140_4
unknown

Not on your lists

1877..1987
DNA (111bp) protein (37aa)

This feature has no annotations

qh_1_scaffold_6140_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


2023..2544
DNA (522bp) protein (174aa)
Probable ribosomal RNA small subunit methyltransferase A {ECO:0000255|HAMAP-Rule:MF_00607}; EC=2.1.1.- {ECO:0000255|HAMAP-Rule:MF_00607};; 16S rRNA dimethyladenosine transferase {ECO:0000255|HAMAP-Rul
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RSMA_NATPD
ksgA; dimethyladenosine transferase
qh_1_scaffold_6140_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2577..2804
DNA (228bp) protein (76aa)
Probable ribosomal RNA small subunit methyltransferase A {ECO:0000255|HAMAP-Rule:MF_00607}; EC=2.1.1.- {ECO:0000255|HAMAP-Rule:MF_00607};; 16S rRNA dimethyladenosine transferase {ECO:0000255|HAMAP-Rul
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RSMA_NATPD
Suspect SCG annotation. See neighboring gene [qh_1_scaffold_6140_5].
ksgA; dimethyladenosine transferase
qh_1_scaffold_6140_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2820..4433
DNA (1614bp) protein (538aa)
Mechanosensitive channel protein MscS n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPM1_NATPD
msc_5; mechanosensitive channel
Mechanosensitive channel protein MscS {ECO:0000313|EMBL:CAI49929.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas
qh_1_scaffold_6140_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4430..5008
DNA (579bp) protein (193aa)
Protein N5-glutamine methyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPM2_NATPD
hemK; protein methyltransferase
Protein N5-glutamine methyltransferase {ECO:0000313|EMBL:CAI49928.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomona
Displaying 8 items

View Taxonomy