ggKbase home page

qh_1_scaffold_1168

Search features with annotation key words

Displaying 15 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_1168_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25..234)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MX84_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49439.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
qh_1_scaffold_1168_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(256..603)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYF8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49440.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_1_scaffold_1168_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(600..1139)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYF8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49440.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_1_scaffold_1168_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1136..2572)
DNA (1437bp) protein (479aa)
DNA primase small subunit PriS {ECO:0000256|HAMAP-Rule:MF_00700, ECO:0000256|SAAS:SAAS00011001}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00700, ECO:0000256|SAAS:SAAS00044138};; TaxID=1227455 species="Ar
pri2; DNA primase small subunit (EC:2.7.7.-)
DNA primase small subunit PriS n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCF5_9EURY
qh_1_scaffold_1168_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2617..4053
DNA (1437bp) protein (479aa)
Serine protease halolysin R4 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N4P4_9EURY
Serine protease halolysin R4 {ECO:0000313|EMBL:EMA52074.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
hly; serine protease halolysin R4
qh_1_scaffold_1168_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4258..4578)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUM6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49442.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
lycopene cyclase
qh_1_scaffold_1168_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4673..5815
DNA (1143bp) protein (381aa)
CBS domain containing membrane protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVU8_9EURY
CBS domain containing membrane protein {ECO:0000313|EMBL:EMA49443.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus s
CBS domain-containing protein
qh_1_scaffold_1168_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6023..6484)
DNA (462bp) protein (154aa)
CMP/dCMP deaminase zinc-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3V6_9EURY
CMP/dCMP deaminase zinc-binding protein {ECO:0000313|EMBL:EMA52612.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
CMP/dCMP deaminase zinc-binding protein
qh_1_scaffold_1168_9
unknown

Not on your lists

6528..7403
DNA (876bp) protein (292aa)

This feature has no annotations

qh_1_scaffold_1168_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7397..7669
DNA (273bp) protein (91aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};;
1,4-dihydroxy-2-naphthoate octaprenyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7H2_9EURY
1,4-dihydroxy-2-naphthoate prenyltransferase
qh_1_scaffold_1168_11
unknown

Not on your lists

comp(7724..9025)
DNA (1302bp) protein (434aa)

This feature has no annotations

qh_1_scaffold_1168_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9045..10031
DNA (987bp) protein (329aa)
O-succinylbenzoate-CoA ligase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3W1_9EURY
O-succinylbenzoate-CoA ligase {ECO:0000313|EMBL:EMA52617.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
O-succinylbenzoate-CoA ligase
qh_1_scaffold_1168_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10231..10980
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N502_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52618.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_1_scaffold_1168_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11005..11349
DNA (345bp) protein (115aa)
Transcription repressor CinR n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N677_9EURY
Transcription repressor CinR {ECO:0000313|EMBL:EMA52619.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
hypothetical protein
qh_1_scaffold_1168_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11757..12839)
DNA (1083bp) protein (361aa)
AMP-dependent synthetase and ligase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MNT3_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EMA47372.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
AMP-dependent synthetase and ligase
Displaying 15 items

View Taxonomy