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qh_1_scaffold_185

Search features with annotation key words

Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_185_1
unknown

Not on your lists

comp(353..1606)
DNA (1254bp) protein (418aa)

This feature has no annotations

qh_1_scaffold_185_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1683..1985
DNA (303bp) protein (101aa)
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:EMA49911.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EMA49911.1};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
DNA-directed RNA polymerase subunit B n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWD7_9EURY
DNA-directed RNA polymerase subunit beta/140 kD subunit
qh_1_scaffold_185_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1987..3813
DNA (1827bp) protein (609aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=62319 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
DNA-directed RNA polymerase subunit B' (EC:2.7.7.6)
DNA-directed RNA polymerase n=3 Tax=Halococcus saccharolyticus RepID=C5NSC9_9EURY
qh_1_scaffold_185_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3838..6792
DNA (2955bp) protein (985aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
DNA-directed RNA polymerase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG30_9EURY
DNA-directed RNA polymerase subunit A'
qh_1_scaffold_185_5
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6785..9448
DNA (2664bp) protein (888aa)
DNA-directed RNA polymerase subunit A {ECO:0000313|EMBL:CCQ32814.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CCQ32814.1};; DNA-directed RNA polymerase subunit A'' protein {ECO:0000313|EMBL:ERJ07195.1}; EC=2.7.7.
DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PP17_9EURY
qh_1_scaffold_185_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9450..9875
DNA (426bp) protein (142aa)
Transcription elongation factor NusA-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVX7_9EURY
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source=
nusA; putative transcription elongation factor NusA protein
qh_1_scaffold_185_7
unknown

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9888..10205
DNA (318bp) protein (106aa)

This feature has no annotations

qh_1_scaffold_185_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


10233..10661
DNA (429bp) protein (143aa)
30S ribosomal protein S12 n=2 Tax=Halococcus RepID=M0MC79_9EURY
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
rps12P; 30S ribosomal protein S12
qh_1_scaffold_185_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


10661..11281
DNA (621bp) protein (207aa)
30S ribosomal protein S7 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZQ5_9EURY
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480, ECO:0000256|RuleBase:RU003621}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
30S ribosomal protein S7P
qh_1_scaffold_185_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11379..12128)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG25_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43375.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_1_scaffold_185_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12342..14534
DNA (2193bp) protein (731aa)
Elongation factor 2 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MX53_9EURY
Elongation factor 2 {ECO:0000256|HAMAP-Rule:MF_00054, ECO:0000256|SAAS:SAAS00088569}; Short=EF-2 {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Haloba
tef2; elongation factor EF-2
qh_1_scaffold_185_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14743..14961)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVX2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49902.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qh_1_scaffold_185_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15103..15642
DNA (540bp) protein (180aa)
Allosteric regulator of homoserine dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWC5_9EURY
Allosteric regulator of homoserine dehydrogenase {ECO:0000313|EMBL:EMA49901.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Ha
allosteric regulator of homoserine dehydrogenase
qh_1_scaffold_185_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15639..16592
DNA (954bp) protein (318aa)
Homoserine dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZQ0_9EURY
Homoserine dehydrogenase {ECO:0000313|EMBL:EMA49900.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
homoserine dehydrogenase
qh_1_scaffold_185_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16727..17992
DNA (1266bp) protein (422aa)
elongation factor 1-alpha (EC:3.6.5.3)
Elongation factor 1-alpha n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG18_9EURY
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
qh_1_scaffold_185_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


17992..18300
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=2 Tax=Halococcus RepID=M0MF95_9EURY
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
rps10P; 30S ribosomal protein S10P
qh_1_scaffold_185_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18406..19023
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDE8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43368.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_1_scaffold_185_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19407..20054
DNA (648bp) protein (216aa)
PHP domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWC0_9EURY
PHP domain-containing protein {ECO:0000313|EMBL:EMA49896.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
putative metal-dependent phosphoesterase, PHP family
qh_1_scaffold_185_19
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20134..20331
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N630_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52145.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
qh_1_scaffold_185_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20383..21660)
DNA (1278bp) protein (426aa)
Ribonuclease R n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MX43_9EURY
Ribonuclease R {ECO:0000313|EMBL:EMA49893.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
ribonuclease R
qh_1_scaffold_185_21
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21737..22045)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MF91_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43364.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_1_scaffold_185_22
unknown

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22134..22271
DNA (138bp) protein (46aa)

This feature has no annotations

qh_1_scaffold_185_23
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


22306..22551
DNA (246bp) protein (82aa)
RNA-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDE1_9EURY
RNA-binding protein {ECO:0000313|EMBL:EMA43363.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
RNA-binding protein
qh_1_scaffold_185_24
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22603..23151)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MC66_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43362.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
transcription anti-termination factor
Displaying 24 items

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