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qh_1_scaffold_600

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_600_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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245..667
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBY1_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25536.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_1_scaffold_600_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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944..1348
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H900_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24505.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_1_scaffold_600_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(1774..2298)
DNA (525bp) protein (175aa)
HAD superfamily hydrolase
Hydrolase, haloacid dehalogenase-like family {ECO:0000313|EMBL:ABC44189.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sour
HAD superfamily hydrolase id=24659595 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qh_1_scaffold_600_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2566..5343
DNA (2778bp) protein (926aa)
DNA polymerase I {ECO:0000313|EMBL:CBH24757.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBH24757.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salin
DNA polymerase I n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Q2_SALRM
polA; DNA polymerase I
qh_1_scaffold_600_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5442..6449
DNA (1008bp) protein (336aa)
zinc protease; K07263 zinc protease [EC:3.4.24.-] id=24659593 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Zinc protease {ECO:0000313|EMBL:CBH24755.1}; EC=3.4.99.- {ECO:0000313|EMBL:CBH24755.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
protease
qh_1_scaffold_600_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6446..6706
DNA (261bp) protein (87aa)
Zinc protease {ECO:0000313|EMBL:CBH24755.1}; EC=3.4.99.- {ECO:0000313|EMBL:CBH24755.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
Zinc protease n=2 Tax=Salinibacter ruber RepID=D5H9Q0_SALRM
zinc protease
qh_1_scaffold_600_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6813..8150
DNA (1338bp) protein (446aa)
Putative zinc protease {ECO:0000313|EMBL:CBH24754.1}; EC=3.4.99.- {ECO:0000313|EMBL:CBH24754.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
Putative zinc protease n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9P9_SALRM
zinc protease
qh_1_scaffold_600_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8131..8796)
DNA (666bp) protein (222aa)
PspC domain family n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S229_SALRD
PspC domain-containing protein
PspC domain family {ECO:0000313|EMBL:ABC45415.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (st
qh_1_scaffold_600_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8848..9483)
DNA (636bp) protein (212aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279, ECO:0000313|EMBL:CBH24752.1}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279, ECO:0000313|EMBL:CBH24752.1};; TaxID=761659 species="Bact
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9P7_SALRM
5-formyltetrahydrofolate cyclo-ligase
qh_1_scaffold_600_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


9878..11263
DNA (1386bp) protein (462aa)
Signal recognition particle protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S231_SALRD
ffh; signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Ince
qh_1_scaffold_600_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


11334..11981
DNA (648bp) protein (216aa)
rpsP; 30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 id=24659588 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385, ECO:0000313|EMBL:CBH24750.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qh_1_scaffold_600_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12012..12605
DNA (594bp) protein (198aa)
Ribosome maturation factor RimM n=2 Tax=Salinibacter ruber RepID=RIMM_SALRD
rimM; 16S rRNA processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
qh_1_scaffold_600_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12676..13392
DNA (717bp) protein (239aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9P3_SALRM
trmD; tRNA (guanine-N(1)-)-methyltransferase
qh_1_scaffold_600_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


13468..13824
DNA (357bp) protein (119aa)
50S ribosomal protein L19 n=2 Tax=Salinibacter ruber RepID=RL19_SALRD
rplS; 50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000255|HAMAP-Rule:MF_00402}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qh_1_scaffold_600_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14059..14874
DNA (816bp) protein (272aa)
Chorismate dehydratase {ECO:0000256|HAMAP-Rule:MF_00995}; EC=4.2.1.151 {ECO:0000256|HAMAP-Rule:MF_00995};; Menaquinone biosynthetic enzyme MqnA {ECO:0000256|HAMAP-Rule:MF_00995}; TaxID=761659 species=
hypothetical protein
hypothetical protein id=24659584 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qh_1_scaffold_600_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14887..15351
DNA (465bp) protein (155aa)
smpB; SsrA-binding protein
smpB; SsrA-binding protein; K03664 SsrA-binding protein id=24659583 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
SsrA-binding protein {ECO:0000255|HAMAP-Rule:MF_00023}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
qh_1_scaffold_600_17
GWE2_Gallionellales_58_10_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15348..15980)
DNA (633bp) protein (211aa)
Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei (strain 1710b) RepID=Q3JNR9_BURP1
hypothetical protein
hypothetical protein Tax=GWE2_Gallionellales_58_10_curated
qh_1_scaffold_600_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16323..16598
DNA (276bp) protein (92aa)
Tyrosine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02007}; EC=6.1.1.1 {ECO:0000255|HAMAP-Rule:MF_02007};; Tyrosyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02007}; Short=TyrRS {ECO:0000255|HAMAP-Rule:M
tyrS; tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] id=24659582 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
tyrS; tyrosyl-tRNA synthetase
qh_1_scaffold_600_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16640..17197)
DNA (558bp) protein (186aa)
lysyl endopeptidase
prpL; Lysyl endopeptidase id=24659581 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Lysyl endopeptidase {ECO:0000313|EMBL:ABC44756.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
Displaying 19 items

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