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qh_1_scaffold_107

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_107_1
unknown

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2..160
DNA (159bp) protein (53aa)

This feature has no annotations

qh_1_scaffold_107_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(763..2817)
DNA (2055bp) protein (685aa)
Glycogen phosphorylase {ECO:0000313|EMBL:CBH23000.1}; EC=2.4.1.1 {ECO:0000313|EMBL:CBH23000.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
Glycogen phosphorylase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4P5_SALRM
glgP; glycogen phosphorylase
qh_1_scaffold_107_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3528..4256)
DNA (729bp) protein (243aa)
transcriptional regulator n=1 Tax=Salisaeta longa RepID=UPI0003B383B7
alkaline phosphatase synthesis transcriptional regulatory protein PhoP
Alkaline phosphatase synthesis transcriptional regulatory proteinphoP {ECO:0000313|EMBL:ABC44211.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermac
qh_1_scaffold_107_4
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4591..4809
DNA (219bp) protein (73aa)
CsbD family protein n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3K9Q6_9RHIZ
CsbD family protein {ECO:0000313|EMBL:EMG51940.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
protein yjbJ
qh_1_scaffold_107_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(5132..6418)
DNA (1287bp) protein (429aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B653DB
signal transduction histidine kinase
qh_1_scaffold_107_6
Coprinopsis cinerea, Coprinopsis, Agaricales, Agaricomycetidae, Basidiomycota, Fungi

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6870..7424
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) RepID=A8NQW1_COPC7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAU86128.1}; TaxID=240176 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Psathyrellaceae; C
qh_1_scaffold_107_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(7564..9966)
DNA (2403bp) protein (801aa)
Transcriptional regulatory protein-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIZ5_KORVE
transcriptional regulatory protein-like
Transcriptional regulatory protein-like protein {ECO:0000313|EMBL:ABF43155.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Kori
qh_1_scaffold_107_8
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10183..10404)
DNA (222bp) protein (74aa)
hypothetical protein id=12555060 bin=CNBR_ACIDO species=Hydrocarboniphaga effusa genus=Hydrocarboniphaga taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein {ECO:0000313|EMBL:EIT72047.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboni
hypothetical protein
qh_1_scaffold_107_9
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

10827..11555
DNA (729bp) protein (243aa)
UPI0003A26DF1 related cluster n=1 Tax=unknown RepID=UPI0003A26DF1
trichohyalin Tax=GWA2_WOR_2_47_8_curated
hypothetical protein
qh_1_scaffold_107_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11734..12456)
DNA (723bp) protein (241aa)
LuxR family transcriptional regulator n=1 Tax=Salisaeta longa RepID=UPI0003B36AC2
two component LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEN73606.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus
qh_1_scaffold_107_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13030..13614)
DNA (585bp) protein (195aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H7I7_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44371.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_1_scaffold_107_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14097..15269
DNA (1173bp) protein (391aa)
Microsomal dipeptidase {ECO:0000313|EMBL:CBH23388.1}; EC=3.4.13.19 {ECO:0000313|EMBL:CBH23388.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
Microsomal dipeptidase n=2 Tax=Salinibacter ruber RepID=D5H5T3_SALRM
microsomal dipeptidase
qh_1_scaffold_107_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15545..16222
DNA (678bp) protein (226aa)
OmpA family protein
OmpA family protein id=24657196 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
OmpA family protein {ECO:0000313|EMBL:ABC44333.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
qh_1_scaffold_107_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(16932..17279)
DNA (348bp) protein (116aa)
50S ribosomal protein L20 n=2 Tax=Salinibacter ruber RepID=RL20_SALRD
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000255|HAMAP-Rule:MF_00382}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qh_1_scaffold_107_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(17430..17627)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=2 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=RL35_SALRD
hypothetical protein
50S ribosomal protein L35 {ECO:0000255|HAMAP-Rule:MF_00514}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qh_1_scaffold_107_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17823..18281)
DNA (459bp) protein (153aa)
infC; translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermac
infC; translation initiation factor IF-3; K02520 translation initiation factor IF-3 id=24658751 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qh_1_scaffold_107_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18525..20492)
DNA (1968bp) protein (656aa)
thrS; threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] id=24658750 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
thrS; threonyl-tRNA synthetase
qh_1_scaffold_107_18
unknown

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comp(20752..21114)
DNA (363bp) protein (121aa)

This feature has no annotations

qh_1_scaffold_107_19
unknown

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comp(21115..21222)
DNA (108bp) protein (36aa)

This feature has no annotations

qh_1_scaffold_107_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21316..21687)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RYV7_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45410.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_1_scaffold_107_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21894..22166)
DNA (273bp) protein (91aa)
clpB; Chaperone clpB
clpB; Chaperone clpB; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB id=24658782 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
Displaying 21 items

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