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qh_1_scaffold_119

Search features with annotation key words

Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_119_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3..98
DNA (96bp) protein (32aa)
Phytoene synthase {ECO:0000313|EMBL:CBH24543.1}; EC=2.5.1.- {ECO:0000313|EMBL:CBH24543.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qh_1_scaffold_119_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

201..1343
DNA (1143bp) protein (381aa)
wcaA; family 2 glycosyl transferase
wcaA; family 2 glycosyl transferase id=24659377 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Glycosyl transferase, family 2 {ECO:0000313|EMBL:CBH24540.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
qh_1_scaffold_119_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1412..1648
DNA (237bp) protein (79aa)
hypothetical protein
hypothetical protein id=24659376 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24539.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_1_scaffold_119_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1699..2628
DNA (930bp) protein (310aa)
Muramoyltetrapeptide carboxypeptidase {ECO:0000313|EMBL:CBH24538.1}; EC=3.4.17.13 {ECO:0000313|EMBL:CBH24538.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
Muramoyltetrapeptide carboxypeptidase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H933_SALRM
ldcA; Muramoyltetrapeptide carboxypeptidase
qh_1_scaffold_119_5
Thalassospira xiamenensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2669..3139)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2M1E3_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJD51605.1}; TaxID=1123366 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira
qh_1_scaffold_119_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3161..3616)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H553_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23158.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_1_scaffold_119_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3837..4439
DNA (603bp) protein (201aa)
Transcription elongation factor GreA n=2 Tax=Salinibacter ruber RepID=D5H932_SALRM
greA; transcription elongation factor greA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=761659 species="Bacteria
qh_1_scaffold_119_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4543..5538
DNA (996bp) protein (332aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|SAAS:SAAS00055690}; EC=2.4.-.- {ECO:0000256|SAAS:SAAS00279069};; EC=2.4.2.- {ECO:0000256|SAAS:SAAS00055699};; Flags: Precursor;;
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHP9_RHOM4
monofunctional biosynthetic peptidoglycan transglycosylase
qh_1_scaffold_119_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5570..6613
DNA (1044bp) protein (348aa)
Threonine aldolase {ECO:0000313|EMBL:CBH24536.1}; EC=4.1.2.5 {ECO:0000313|EMBL:CBH24536.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sal
Threonine aldolase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H931_SALRM
ltaE; threonine aldolase
qh_1_scaffold_119_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6634..7245)
DNA (612bp) protein (204aa)
Pyridoxamine 5'-phosphate oxidase {ECO:0000313|EMBL:CBH24535.1}; EC=1.4.3.5 {ECO:0000313|EMBL:CBH24535.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodo
Pyridoxamine 5'-phosphate oxidase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H930_SALRM
pdxH; pyridoxamine 5'-phosphate oxidase
qh_1_scaffold_119_11
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7314..8399)
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B3284C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ65049.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
qh_1_scaffold_119_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8658..9320)
DNA (663bp) protein (221aa)
mhpD; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
mhpD; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase id=24659371 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Possible 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:ABC44266.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibact
qh_1_scaffold_119_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


9455..9958
DNA (504bp) protein (168aa)
50S ribosomal protein L21 n=2 Tax=Salinibacter ruber RepID=RL21_SALRD
rplU; 50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000255|HAMAP-Rule:MF_01363}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qh_1_scaffold_119_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


10203..10463
DNA (261bp) protein (87aa)
rpmA; 50S ribosomal protein L27
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 id=24659369 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539, ECO:0000313|EMBL:CBH24532.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qh_1_scaffold_119_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10640..11881
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H926_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24531.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_1_scaffold_119_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11874..12800)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H925_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24530.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_1_scaffold_119_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13187..15265
DNA (2079bp) protein (693aa)
peptidyl-prolyl cis-trans isomerase; K01802 peptidylprolyl isomerase [EC:5.2.1.8] id=24659366 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
peptidyl-prolyl cis-trans isomerase
qh_1_scaffold_119_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15280..16143)
DNA (864bp) protein (288aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
Diaminopimelate epimerase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H923_SALRM
dapF; diaminopimelate epimerase
qh_1_scaffold_119_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16253..17212
DNA (960bp) protein (320aa)
PhoH family protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2P3_SALRD
phoH; PhoH-lihe protein
PhoH family protein {ECO:0000313|EMBL:ABC43690.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
qh_1_scaffold_119_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17414..18268)
DNA (855bp) protein (285aa)
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:ABC45405.1}; EC=1.1.1.157 {ECO:0000313|EMBL:ABC45405.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rh
hypothetical protein id=24656764 bin=Salinibacter_J07SB67 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_J07SB67
3-hydroxybutyryl-CoA dehydrogenase
qh_1_scaffold_119_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18692..19123)
DNA (432bp) protein (144aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase
Aspartate 1-decarboxylase n=2 Tax=Salinibacter ruber RepID=PAND_SALRD
panD; aspartate 1-decarboxylase
qh_1_scaffold_119_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19172..20053)
DNA (882bp) protein (294aa)
Pantothenate synthetase {ECO:0000255|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000255|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000255|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000255|HAMAP-
Pantothenate synthetase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=PANC_SALRD
panC; pantoate--beta-alanine ligase
qh_1_scaffold_119_23
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20479..21207)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Paenibacillus mucilaginosus (strain KNP414) RepID=F8FKG6_PAEMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI45559.1}; TaxID=1036673 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus (strain
qh_1_scaffold_119_24
Halomonas salina, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21542..22573
DNA (1032bp) protein (344aa)
sodium:calcium antiporter n=1 Tax=Halomonas smyrnensis RepID=UPI000368CF20
Sodium:calcium antiporter {ECO:0000313|EMBL:KGE78392.1}; TaxID=42565 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas salina.;"
Na+/Ca2+-exchanging protein
qh_1_scaffold_119_25
unknown

Not on your lists

comp(22917..23333)
DNA (417bp) protein (139aa)

This feature has no annotations

qh_1_scaffold_119_26
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(23516..25615)
DNA (2100bp) protein (700aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I113_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL98950.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
qh_1_scaffold_119_27
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25953..26657
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C7Z6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CEJ69686.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
hypothetical protein
qh_1_scaffold_119_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27993..28559)
DNA (567bp) protein (189aa)
Auracyanin A n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S270_SALRD
auracyanin A
Auracyanin A {ECO:0000313|EMBL:ABC43792.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain D
qh_1_scaffold_119_29
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28811..29677)
DNA (867bp) protein (289aa)
(2R)-phospho-3-sulfolactate synthase ComA n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHJ1_RHOMR
(2R)-phospho-3-sulfolactate synthase ComA
(2R)-phospho-3-sulfolactate synthase ComA {ECO:0000313|EMBL:AEN73001.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source=
qh_1_scaffold_119_30
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(29796..31184)
DNA (1389bp) protein (463aa)
2-methylcitrate dehydratase; K01720 2-methylcitrate dehydratase [EC:4.2.1.79] id=14632246 bin=bin9_gal15 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
2-methylcitrate dehydratase; K01720 2-methylcitrate dehydratase [EC:4.2.1.79] Tax=CSP1_3_Armatimonadetes
putative 2-methylcitrate dehydratase (EC:4.2.1.79)
Displaying items 1-30 of 33 in total

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