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qh_1_scaffold_3016

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_3016_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(1..630)
DNA (630bp) protein (210aa)
Malto-oligosyltrehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337, ECO:0000313|EMBL:CBH23756.1}; Short=MTHase {ECO:0000256|PIRNR:PIRNR006337};; EC=3.2.1.141 {ECO:0000256|PIRNR:PIRNR006337, ECO:0
Malto-oligosyltrehalose trehalohydrolase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6V1_SALRM
treZ; Malto-oligosyltrehalose trehalohydrolase
qh_1_scaffold_3016_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(699..2213)
DNA (1515bp) protein (505aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:
4-alpha-glucanotransferase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4T3_SALRD
malQ; 4-alpha-glucanotransferase
qh_1_scaffold_3016_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2670..3818)
DNA (1149bp) protein (383aa)
membrane flanked domain-containing protein
Bacterial membrane flanked domain family {ECO:0000313|EMBL:ABC45666.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
hypothetical protein; K08981 putative membrane protein id=24657528 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qh_1_scaffold_3016_4
unknown

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4025..4312
DNA (288bp) protein (96aa)

This feature has no annotations

qh_1_scaffold_3016_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(4293..4829)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6V4_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23759.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_1_scaffold_3016_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(5006..5542)
DNA (537bp) protein (179aa)
aroK; shikimate kinase; K00891 shikimate kinase [EC:2.7.1.71] id=24657530 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Shikimate kinase {ECO:0000255|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000255|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000255|HAMAP-Rule:MF_00109};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroi
aroK; shikimate kinase
qh_1_scaffold_3016_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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5898..6437
DNA (540bp) protein (180aa)
truA; tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] id=24657531 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
tRNA pseudouridine synthase A {ECO:0000255|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000255|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000255|HAMAP-Rule:MF_00171}; tRNA pseudouridy
truA; tRNA pseudouridine synthase A
Displaying 7 items

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