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qh_1_scaffold_354

Search features with annotation key words

Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_354_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(3..494)
DNA (492bp) protein (164aa)
Integral membrane protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA03_SALRM
hypothetical protein
Integral membrane protein {ECO:0000313|EMBL:CBH24858.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
qh_1_scaffold_354_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(530..1588)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA04_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24859.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_1_scaffold_354_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2065..2280
DNA (216bp) protein (72aa)
csp; cold-shock protein
csp; cold-shock protein; K03704 cold shock protein (beta-ribbon, CspA family) id=24659688 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Cold shock-like protein {ECO:0000313|EMBL:CBH24860.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_1_scaffold_354_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2480..3790)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA06_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24861.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_1_scaffold_354_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3959..6217)
DNA (2259bp) protein (753aa)
hypothetical protein id=24659690 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45490.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_1_scaffold_354_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6258..7202)
DNA (945bp) protein (315aa)
hypothetical protein
hypothetical protein id=24659691 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24862.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_1_scaffold_354_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7445..7636)
DNA (192bp) protein (64aa)
hypothetical protein
hypothetical protein id=24659692 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24863.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_1_scaffold_354_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7810..8541)
DNA (732bp) protein (244aa)
Acetylglutamate kinase {ECO:0000313|EMBL:CBH24864.1}; EC=2.7.2.8 {ECO:0000313|EMBL:CBH24864.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
argB; Acetylglutamate kinase
argB; Acetylglutamate kinase id=24659693 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qh_1_scaffold_354_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8836..10845)
DNA (2010bp) protein (670aa)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ABC44685.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
mmgC; acyl-CoA dehydrogenase id=24659694 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
acyl-CoA dehydrogenase
qh_1_scaffold_354_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11150..11971
DNA (822bp) protein (274aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=309807 species="Bacte
Orotidine 5'-phosphate decarboxylase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1S9_SALRD
pyrF; orotidine 5'-phosphate decarboxylase
qh_1_scaffold_354_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12034..12432)
DNA (399bp) protein (133aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5HA12_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24867.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_1_scaffold_354_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12437..12691)
DNA (255bp) protein (85aa)
Universal stress protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1S7_SALRD
universal stress protein
Universal stress protein {ECO:0000313|EMBL:ABC45642.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
qh_1_scaffold_354_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12741..13664)
DNA (924bp) protein (308aa)
Universal stress protein Usp n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA14_SALRM
usp; universal stress protein Usp
Universal stress protein Usp {ECO:0000313|EMBL:CBH24869.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qh_1_scaffold_354_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14046..14330
DNA (285bp) protein (95aa)
hypothetical protein
hypothetical protein id=24659699 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24871.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_1_scaffold_354_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14464..15780)
DNA (1317bp) protein (439aa)
hemL; glutamate-1-semialdehyde 2,1-aminomutase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] id=24659701 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, EC
hemL; glutamate-1-semialdehyde 2,1-aminomutase
qh_1_scaffold_354_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15839..16447)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA19_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24874.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_1_scaffold_354_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16498..17841)
DNA (1344bp) protein (448aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522};; Heme synthase {ECO:0000256|HAMAP-Rule:MF
Ferrochelatase n=2 Tax=Salinibacter ruber RepID=D5HA20_SALRM
hemH; ferrochelatase
qh_1_scaffold_354_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17972..18955)
DNA (984bp) protein (328aa)
Coproporphyrinogen oxidase {ECO:0000256|SAAS:SAAS00122066}; EC=1.3.3.3 {ECO:0000256|SAAS:SAAS00122066, ECO:0000313|EMBL:CBH24876.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order
Coproporphyrinogen III oxidase, aerobic n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA21_SALRM
hemF; Coproporphyrinogen III oxidase, aerobic
qh_1_scaffold_354_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19075..19785)
DNA (711bp) protein (237aa)
Ribosomal large subunit pseudouridine synthase D n=2 Tax=Salinibacter ruber RepID=D5HA22_SALRM
rluA; ribosomal large subunit pseudouridine synthase A
Ribosomal large subunit pseudouridine synthase A {ECO:0000313|EMBL:ABC44497.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;"
qh_1_scaffold_354_20
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19934..21715)
DNA (1782bp) protein (594aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YG60_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41848.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
qh_1_scaffold_354_21

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comp(21775..23181)
DNA (1407bp) protein (469aa)
transposase IS116/IS110/IS902 id=30791 bin=ACD28 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER
Transposase IS116/IS110/IS902 {ECO:0000313|EMBL:EKD93539.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transposase
Displaying 21 items

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