ggKbase home page

qh_10_scaffold_994

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_994_1
unknown

Not on your lists

comp(3..248)
DNA (246bp) protein (82aa)

This feature has no annotations

qh_10_scaffold_994_2
unknown

Not on your lists

comp(480..734)
DNA (255bp) protein (85aa)

This feature has no annotations

qh_10_scaffold_994_3
unknown

Not on your lists

comp(765..1214)
DNA (450bp) protein (150aa)

This feature has no annotations

qh_10_scaffold_994_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1887..4475
DNA (2589bp) protein (863aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPC5_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50026.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qh_10_scaffold_994_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4468..7365
DNA (2898bp) protein (966aa)
UvrD/REP family helicase {ECO:0000313|EMBL:CAI50025.1}; EC=3.6.4.- {ECO:0000313|EMBL:CAI50025.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natron
UvrD/REP family helicase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPC6_NATPD
ATP-dependent helicase
qh_10_scaffold_994_6
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7610..7942
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NRU6_HALBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ66883.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
qh_10_scaffold_994_7
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7904..8437)
DNA (534bp) protein (178aa)
Transposase n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0BZ36_9EURY
Transposase {ECO:0000313|EMBL:ELZ15678.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 13563.;"
tnp6; transposase
qh_10_scaffold_994_8
unknown

Not on your lists

9082..9513
DNA (432bp) protein (144aa)

This feature has no annotations

qh_10_scaffold_994_9
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9518..10306)
DNA (789bp) protein (263aa)
Predicted transcriptional regulator, contains C-terminal CBS domains n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NSC6_HALBP
transcriptional regulator
Predicted transcriptional regulator, contains C-terminal CBS domains {ECO:0000313|EMBL:ADQ66915.1}; Transcriptional regulator {ECO:0000313|EMBL:ELY30421.1}; TaxID=469382 species="Archaea; Euryarchaeot
qh_10_scaffold_994_10
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10580..11494
DNA (915bp) protein (305aa)
Adaptin protein n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AL78_NATGS
Armadillo/beta-catenin-like repeat protein
Adaptin protein {ECO:0000313|EMBL:ELY65292.1}; Armadillo/beta-catenin-like repeat protein {ECO:0000313|EMBL:AFZ73805.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natri
qh_10_scaffold_994_11
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11788..12369
DNA (582bp) protein (194aa)
hypothetical protein id=24642815 bin=halophilic_archaeon_J07HB67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HB67
Uncharacterized protein {ECO:0000313|EMBL:ERH12733.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
transcriptional regulator
qh_10_scaffold_994_12
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12440..13192)
DNA (753bp) protein (251aa)
Pirin domain protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VPH8_9EURY
Pirin domain protein {ECO:0000313|EMBL:ELY38892.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;"
conserved pirin domain protein
qh_10_scaffold_994_13
unknown

Not on your lists

comp(13277..13711)
DNA (435bp) protein (145aa)

This feature has no annotations

qh_10_scaffold_994_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13801..14391
DNA (591bp) protein (197aa)
Aspartyl/glutamyl-tRNA amidotransferase subunit A {ECO:0000313|EMBL:EMA43644.1}; EC=6.3.5.- {ECO:0000313|EMBL:EMA43644.1};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales
Aspartyl/glutamyl-tRNA amidotransferase subunit A n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG32_9EURY
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A
qh_10_scaffold_994_15
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14369..14575
DNA (207bp) protein (69aa)
gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A (EC:6.3.5.-) id=24649934 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Aspartyl/glutamyl-tRNA amidotransferase subunit A {ECO:0000313|EMBL:ERH11012.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
qh_10_scaffold_994_16
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14582..15199
DNA (618bp) protein (206aa)
gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A (EC:6.3.5.-) id=24649934 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Aspartyl/glutamyl-tRNA amidotransferase subunit A {ECO:0000313|EMBL:ERH11012.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
Aspartyl-tRNA(Asn) amidotransferase subunit A
qh_10_scaffold_994_17
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15350..16300
DNA (951bp) protein (317aa)
ArsR family transcription regulator n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GX97_HALVD
hypothetical protein rbh
ArsR family transcription regulator {ECO:0000313|EMBL:ADE04481.1}; Uncharacterized protein {ECO:0000313|EMBL:ELY24969.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Hal
qh_10_scaffold_994_18
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16302..17192
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0HJ78_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CQR49651.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
hypothetical protein
qh_10_scaffold_994_19
unknown

Not on your lists

17292..17609
DNA (318bp) protein (106aa)

This feature has no annotations

qh_10_scaffold_994_20
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17529..18347)
DNA (819bp) protein (273aa)
Zinc finger SWIM domain protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0C490_9EURY
Zinc finger SWIM domain protein {ECO:0000313|EMBL:ELZ16754.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermoto
zinc finger SWIM domain protein
qh_10_scaffold_994_21
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18388..18726)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NVB5_HALBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ69104.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
qh_10_scaffold_994_22
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18925..20118
DNA (1194bp) protein (398aa)
Transposase, IS605 OrfB family protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WSM5_9EURY
Transposase, IS605 OrfB family protein {ECO:0000313|EMBL:ELY52211.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum b
transposase, IS605 OrfB family rbh
qh_10_scaffold_994_23
unknown

Not on your lists

comp(20467..20919)
DNA (453bp) protein (151aa)

This feature has no annotations

qh_10_scaffold_994_24
unknown

Not on your lists

comp(21149..21616)
DNA (468bp) protein (156aa)

This feature has no annotations

Displaying 24 items

View Taxonomy