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qh_10_scaffold_1055

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_1055_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..371
-----------------
DNA (369bp)
protein (123aa)
Ribosomal protein S4E n=1 Tax=halophilic archaeon J07HX64 RepID=U1P2T1_9EURY
Ribosomal protein S4E {ECO:0000313|EMBL:ERH10985.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
ribosomal protein L5
qh_10_scaffold_1055_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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368..547
-----------------
DNA (180bp)
protein (60aa)
30S ribosomal protein S14 type Z n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIM3_9EURY
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex ca
rps14P; 30S ribosomal protein S14P
qh_10_scaffold_1055_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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544..936
-----------------
DNA (393bp)
protein (131aa)
30S ribosomal protein S8 n=1 Tax=halophilic archaeon J07HX64 RepID=U1QYD7_9EURY
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
rps8p; 30S ribosomal protein S8
qh_10_scaffold_1055_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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939..1511
-----------------
DNA (573bp)
protein (191aa)
50S ribosomal protein L6 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CKI2_9EURY
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
rpl6p; 50S ribosomal protein L6
qh_10_scaffold_1055_5
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1511..2539
-----------------
DNA (1029bp)
protein (343aa)
50S ribosomal protein L32e n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W8Y2_9EURY
50S ribosomal protein L32e
50S ribosomal protein L32e {ECO:0000313|EMBL:AGN02183.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bs
qh_10_scaffold_1055_6
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2536..2985
-----------------
DNA (450bp)
protein (150aa)
50S ribosomal protein L19e n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K8G9_9EURY
50S ribosomal protein L19e {ECO:0000256|HAMAP-Rule:MF_01475}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolyti
rpl19e; 50S ribosomal protein L19
qh_10_scaffold_1055_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2985..3545
-----------------
DNA (561bp)
protein (187aa)
50S ribosomal protein L18P n=1 Tax=halophilic archaeon J07HX64 RepID=U1P2T4_9EURY
50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon
qh_10_scaffold_1055_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3542..4186
-----------------
DNA (645bp)
protein (215aa)
SSU ribosomal protein S5P n=1 Tax=halophilic archaeon J07HX64 RepID=U1PKL8_9EURY
SSU ribosomal protein S5P {ECO:0000313|EMBL:ERH10991.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
rps5p; 30S ribosomal protein S5P
qh_10_scaffold_1055_9
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4183..4647
-----------------
DNA (465bp)
protein (155aa)
rpl30p; 50S ribosomal protein L30P; K02907 large subunit ribosomal protein L30 id=24622061 bin=Halonotius_J07HN6 species=Halonotius sp. J07HN6 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" s
rpl30; 50S ribosomal protein L30
qh_10_scaffold_1055_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4647..5141
-----------------
DNA (495bp)
protein (165aa)
50S ribosomal protein L27Ae (L15p) id=24649914 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
50S ribosomal protein L27Ae (L15p)
qh_10_scaffold_1055_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5143..6609
-----------------
DNA (1467bp)
protein (489aa)
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY id=24649915 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; Protein transport protein SEC61 subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=108502
secY; preprotein translocase subunit SecY (TC 3.A.5.1.1)
qh_10_scaffold_1055_12
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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7050..7223
-----------------
DNA (174bp)
protein (58aa)
ABC transporter n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WGN1_9EURY
ABC transporter {ECO:0000313|EMBL:ELY48431.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 10635.;"
ABC-type multidrug transport system, ATPase component
Displaying 12 items

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