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qh_10_scaffold_1565

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_1565_1
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(40..1035)
DNA (996bp) protein (332aa)
Leucyl aminopeptidase n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PKS5_9EURY
Leucyl aminopeptidase {ECO:0000313|EMBL:EMA70518.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560.;
hypothetical protein
qh_10_scaffold_1565_2
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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comp(1032..1730)
DNA (699bp) protein (233aa)
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family id=3772781 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Paracoccus taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter
qh_10_scaffold_1565_3
Haloferax sp. ATCC BAA-644, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1717..2475)
DNA (759bp) protein (253aa)
Branched-chain amino acid ABC transporter ATP-binding protein n=3 Tax=Haloferax RepID=M0FGZ4_9EURY
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ72088.1}; TaxID=1227462 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" so
livG4; branched-chain amino acid ABC transporter ATP-binding protein
qh_10_scaffold_1565_4
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

comp(2468..3499)
DNA (1032bp) protein (344aa)
Inner-membrane translocator n=1 Tax=Afipia sp. 1NLS2 RepID=D6V751_9BRAD
amino acid/amide ABC transporter membrane protein 2, HAAT family Tax=RBG_16_KB1_OP1_55_9_curated
branched chain amino acid ABC transporter permease
qh_10_scaffold_1565_5
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

comp(3496..4362)
DNA (867bp) protein (289aa)
ABC transporter permease n=2 Tax=Oligotropha carboxidovorans RepID=F8BH33_OLICM
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=RBG_16_KB1_OP1_55_9_curated
ABC transporter permease
qh_10_scaffold_1565_6
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

comp(4641..6014)
DNA (1374bp) protein (458aa)
Extracellular ligand-binding receptor n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PFS3_CHIPD
ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RBG_16_KB1_OP1_55_9_curated
extracellular ligand-binding receptor
qh_10_scaffold_1565_7
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6227..6718
DNA (492bp) protein (164aa)
GCN5-related N-acetyltransferase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QTC7_9EURY
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EFW91856.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauc
acetyltransferase
qh_10_scaffold_1565_8
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7017..7895
DNA (879bp) protein (293aa)
Molybdopterin dehydrogenase FAD-binding protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M0P5_9EURY
molybdopterin dehydrogenase FAD-binding protein
Molybdopterin dehydrogenase FAD-binding protein {ECO:0000313|EMBL:EMA38189.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
qh_10_scaffold_1565_9
unknown

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8608..9099
DNA (492bp) protein (164aa)

This feature has no annotations

qh_10_scaffold_1565_10
unknown

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9178..10548
DNA (1371bp) protein (457aa)

This feature has no annotations

qh_10_scaffold_1565_11
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

10644..11288
DNA (645bp) protein (215aa)
Putative cyclase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUV8_RUBXD
putative cyclase
Putative cyclase {ECO:0000313|EMBL:ABG04820.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter x
qh_10_scaffold_1565_12
unknown

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comp(11138..11758)
DNA (621bp) protein (207aa)

This feature has no annotations

qh_10_scaffold_1565_13
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

12259..12741
DNA (483bp) protein (161aa)
Carbon monoxide dehydrogenase subunit G n=1 Tax=Halogranum salarium B-1 RepID=J3JFP1_9EURY
carbon monoxide dehydrogenase subunit G Tax=RBG_16_RIF_CHLX_69_14_curated
Carbon monoxide oxidation accessory protein CoxG
qh_10_scaffold_1565_14
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12773..15154)
DNA (2382bp) protein (794aa)
Putative carbon monoxide dehydrogenase subunit L protein n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1M9I3_RHIL3
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP69182.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
dehydrogenase/reductase
qh_10_scaffold_1565_15
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15219..16130
DNA (912bp) protein (304aa)
carbon-monoxide dehydrogenase (acceptor); K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2] Tax=RBG_13_Deltaproteobacteria_52_11_curated
carbon-monoxide dehydrogenase n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237B0CC
molybdopterin dehydrogenase FAD-binding protein
qh_10_scaffold_1565_16
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16127..16639
DNA (513bp) protein (171aa)
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Putative 4-hydroxybenzoyl-CoA reductase gamma subunit (Fragment) id=1904947 bin=GWD2_Deltaproteobacteria_55_8 species=Clostridia bacterium enrichment culture clone BF genus=unknown taxon_order=unknown taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
qh_10_scaffold_1565_17
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16721..17485
DNA (765bp) protein (255aa)
3-oxoacyl-(Acyl-carrier protein) reductase n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QES4_9BRAD
Short-chain dehydrogenase {ECO:0000313|EMBL:KJC48752.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium
short-chain dehydrogenase/reductase SDR
Displaying 17 items

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