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qh_10_scaffold_240

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_240_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(6..632)
-----------------
DNA (627bp)
protein (209aa)
Phage integrase family n=1 Tax=Salinibacter ruber (strain M8) RepID=D6CVZ9_SALRM
xerC; Phage integrase family
Phage integrase family {ECO:0000313|EMBL:CBH22828.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
qh_10_scaffold_240_2
unknown

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comp(972..1073)
-----------------
DNA (102bp)
protein (34aa)

This feature has no annotations

qh_10_scaffold_240_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1178..3325
-----------------
DNA (2148bp)
protein (716aa)
mcrA; helicase
mcrA; helicase id=24658233 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative helicase {ECO:0000313|EMBL:CBH25436.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (str
qh_10_scaffold_240_4

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3395..3955
-----------------
DNA (561bp)
protein (187aa)
hypothetical protein id=17885 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
Uncharacterized protein {ECO:0000313|EMBL:EKE02601.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
qh_10_scaffold_240_5

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3959..5500
-----------------
DNA (1542bp)
protein (514aa)
Type I restriction-modification system, M subunit id=4276600 bin=GWC2_Ignavibacteria_38_9 species=Leptospira santarosai genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
Uncharacterized protein {ECO:0000313|EMBL:EKE02602.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
type I restriction-modification system, DNA-methyltransferase subunit M HsdM
qh_10_scaffold_240_6
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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5648..6814
-----------------
DNA (1167bp)
protein (389aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LJY8_SYNFM
filamentation induced by cAMP protein fic
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:ABK17740.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter
qh_10_scaffold_240_7
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6871..7176
-----------------
DNA (306bp)
protein (102aa)
Type I restriction-modification system, S subunit, EcoA family protein n=1 Tax=Pseudomonas stutzeri ATCC 14405 = CCUG 16156 RepID=H7EZJ9_PSEST
Type I restriction-modification system, S subunit, EcoA family protein {ECO:0000313|EMBL:EHY79173.1}; TaxID=32042 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadac
type I restriction-modification system, S subunit, EcoA family
qh_10_scaffold_240_8
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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7529..8188
-----------------
DNA (660bp)
protein (220aa)
type I restriction-modification system, M subunit n=1 Tax=Lentibacillus jeotgali RepID=UPI0002628011
type I restriction enzyme specificity chain-like protein
Type I restriction enzyme specificity chain-like protein {ECO:0000313|EMBL:AIE86040.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimon
qh_10_scaffold_240_9
Psychroflexus torquis, Psychroflexus, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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8192..11308
-----------------
DNA (3117bp)
protein (1039aa)
Type I restriction-modification system, restriction subunit R HsdR n=1 Tax=Psychroflexus torquis (strain ATCC 700755 / ACAM 623) RepID=K4IDQ9_PSYTT
Type I restriction-modification system, restriction subunit R HsdR {ECO:0000313|EMBL:AFU67261.1}; TaxID=313595 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Ps
type I restriction-modification system, restriction subunit R HsdR
qh_10_scaffold_240_10

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11298..12020
-----------------
DNA (723bp)
protein (241aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EW88_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE02610.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
qh_10_scaffold_240_11
unknown

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12142..13071
-----------------
DNA (930bp)
protein (310aa)

This feature has no annotations

qh_10_scaffold_240_12
unknown

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13078..13320
-----------------
DNA (243bp)
protein (81aa)

This feature has no annotations

qh_10_scaffold_240_13
unknown

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13432..13632
-----------------
DNA (201bp)
protein (67aa)

This feature has no annotations

Displaying 13 items

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