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qh_10_scaffold_2410

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_2410_1
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..617)
DNA (615bp) protein (205aa)
Electron transfer flavoprotein alpha/beta-subunit n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZF1_HALMD
electron transfer flavoprotein alpha/beta-subunit
Electron transfer flavoprotein alpha/beta-subunit {ECO:0000313|EMBL:ACV48719.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source=
qh_10_scaffold_2410_2
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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787..1671
DNA (885bp) protein (295aa)
lye; lycopene elongase (EC:2.5.1.-) id=24654806 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
ubiA; prenyltransferase (EC:2.5.1.-)
UbiA prenyltransferase {ECO:0000313|EMBL:ERG89751.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
qh_10_scaffold_2410_3
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1664..2566
DNA (903bp) protein (301aa)
Carotene biosynthesis associated membrane protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1P867_9EURY
Carotene biosynthesis associated membrane protein {ECO:0000313|EMBL:ERG89752.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
carotene biosynthesis associated membrane protein
qh_10_scaffold_2410_4
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2700..3662)
DNA (963bp) protein (321aa)
Phytoene synthase {ECO:0000313|EMBL:ERH08693.1}; EC=2.5.1.32 {ECO:0000313|EMBL:ERH08693.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon
phytoene synthase (EC:2.5.1.32)
Phytoene synthase n=1 Tax=halophilic archaeon J07HX64 RepID=U1QNP8_9EURY
qh_10_scaffold_2410_5
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3993..4661)
DNA (669bp) protein (223aa)
translation initiation factor IF-6; K03264 translation initiation factor 6 id=24654821 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032}; Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" sourc
translation initiation factor IF-6
qh_10_scaffold_2410_6
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4664..4942)
DNA (279bp) protein (93aa)
50S ribosomal protein L31e n=1 Tax=Natronococcus occultus SP4 RepID=L0JSK5_9EURY
ribosomal protein L31E
50S ribosomal protein L31e {ECO:0000256|HAMAP-Rule:MF_00410}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus S
qh_10_scaffold_2410_7

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comp(4939..5091)
DNA (153bp) protein (51aa)
Ribosomal protein L39e n=1 Tax=uncultured organism RepID=M1P2K2_9ZZZZ
Ribosomal protein L39e {ECO:0000313|EMBL:AGF93646.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
ribosomal protein L39E
qh_10_scaffold_2410_8
unknown

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5223..5351
DNA (129bp) protein (43aa)

This feature has no annotations

qh_10_scaffold_2410_9
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(5348..5899)
DNA (552bp) protein (184aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1227488 species="A
2'-5' RNA ligase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CIP7_9EURY
2'-5' RNA ligase
qh_10_scaffold_2410_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5952..6707
DNA (756bp) protein (252aa)
TPR repeat-containing protein id=24647550 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Tetratricopeptide repeat protein {ECO:0000313|EMBL:ERH08687.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
TPR repeat-containing protein
qh_10_scaffold_2410_11
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6709..7008
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1MZY6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG89770.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
qh_10_scaffold_2410_12
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7071..8408)
DNA (1338bp) protein (446aa)
Sulfatase n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V6X5_HALMA
sulfatase
Sulfatase {ECO:0000313|EMBL:AAV44727.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (strain ATCC 43049
qh_10_scaffold_2410_13
unknown

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comp(8479..8655)
DNA (177bp) protein (59aa)

This feature has no annotations

qh_10_scaffold_2410_14
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8774..9946)
DNA (1173bp) protein (391aa)
Lipopolysaccharide transferase family protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NEA8_9EURY
Lipopolysaccharide transferase family protein {ECO:0000313|EMBL:EMA56186.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloc
group 1 glycosyl transferase
qh_10_scaffold_2410_15
unknown

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10075..10254
DNA (180bp) protein (60aa)

This feature has no annotations

Displaying 15 items

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