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qh_10_scaffold_224

Search features with annotation key words

Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_224_1
unknown

Not on your lists

comp(361..621)
DNA (261bp) protein (87aa)

This feature has no annotations

qh_10_scaffold_224_2
unknown

Not on your lists

971..1201
DNA (231bp) protein (77aa)

This feature has no annotations

qh_10_scaffold_224_3
Lobosphaera incisa, Lobosphaera, Chlorellales, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(1198..1752)
DNA (555bp) protein (185aa)
Putative uncharacterized protein ymf39 n=1 Tax=Chara vulgaris RepID=Q7YAK5_CHAVU
ATP synthase F0 subunit beta {ECO:0000313|EMBL:AKF78645.1}; TaxID=312850 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Lobosphaera.;" source="Lobosphae
atp4; ATPase subunit 4
qh_10_scaffold_224_4
Chlorella sorokiniana, Chlorella, Chlorellales, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(1792..2088)
DNA (297bp) protein (99aa)
NADH dehydrogenase subunit K (EC:1.6.5.3)
NADH dehydrogenase subunit 4L n=1 Tax=Chlorella sp. ArM0029B RepID=U5U5M9_9CHLO
NADH dehydrogenase subunit 4L {ECO:0000313|EMBL:AII02118.1}; TaxID=3076 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Chlorella.;" source="Chlorella so
qh_10_scaffold_224_5
unknown

Not on your lists

comp(2381..2545)
DNA (165bp) protein (55aa)

This feature has no annotations

qh_10_scaffold_224_6
Reclinomonas americana, Reclinomonas, Eukaryota

Not on your lists


comp(2545..3030)
DNA (486bp) protein (162aa)
30S ribosomal protein S4 n=1 Tax=Clostridium botulinum (strain 657 / Type Ba4) RepID=C3KV39_CLOB6
rpsD_1; 30S ribosomal protein S4
Ribosomal protein S4 {ECO:0000313|EMBL:AGH24285.1}; TaxID=1295593 species="Eukaryota; Jakobida; Histionidae; Reclinomonas.;" source="Reclinomonas americana ATCC 50633.;"
Eukaryote, probably algal Jill Banfield (10/16/14)
qh_10_scaffold_224_7
Ahnfeltia plicata, Ahnfeltia, Ahnfeltiales, Florideophyceae, Eukaryota

Not on your lists

comp(3005..3739)
DNA (735bp) protein (245aa)
Preprotein translocase subunit SecY {ECO:0000313|EMBL:AHB62122.1}; TaxID=28023 species="Eukaryota; Rhodophyta; Florideophyceae; Ahnfeltiales; Ahnfeltiaceae; Ahnfeltia.;" source="Ahnfeltia plicata.;"
qh_10_scaffold_224_8
unknown

Not on your lists

comp(3884..4186)
DNA (303bp) protein (101aa)

This feature has no annotations

qh_10_scaffold_224_9
Monomastix sp. OKE-1, Monomastix, Monomastigales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(4754..4978)
DNA (225bp) protein (75aa)
ATP synthase F0 subunit 9 n=1 Tax=Monomastix sp. (strain OKE-1) RepID=U5YGG8_MONSK
ATP synthase subunit 9, mitochondrial {ECO:0000256|RuleBase:RU003575}; TaxID=141716 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Monomastigales; Monomastigaceae; Mon
atpE; ATP synthase, F0 sector, c subunit
qh_10_scaffold_224_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5096..5422)
DNA (327bp) protein (109aa)
30S ribosomal protein S11 n=1 Tax=Sulfobacillus acidophilus (strain ATCC 700253 / DSM 10332 / NAL) RepID=G8TXI3_SULAD
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="
Eukaryote, likely algal Jill Banfield (10/16/14)
qh_10_scaffold_224_11
unknown

Not on your lists

comp(5423..5569)
DNA (147bp) protein (49aa)

This feature has no annotations

qh_10_scaffold_224_12
Lobosphaera incisa, Lobosphaera, Chlorellales, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists


comp(5559..6116)
DNA (558bp) protein (186aa)
Ribosomal protein L6 n=1 Tax=Jakoba libera RepID=M4QL74_9EUKA
Ribosomal protein L6 {ECO:0000313|EMBL:AKF78654.1}; TaxID=312850 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Lobosphaera.;" source="Lobosphaera incis
Eukaryote, likely algal Jill Banfield (10/16/14)
qh_10_scaffold_224_13
Monomastix sp. OKE-1, Monomastix, Monomastigales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists


comp(6119..6481)
DNA (363bp) protein (121aa)
Ribosomal protein S14 n=1 Tax=Monomastix sp. (strain OKE-1) RepID=U5YER9_MONSK
Ribosomal protein S14 {ECO:0000313|EMBL:AGZ90207.1}; TaxID=141716 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Monomastigales; Monomastigaceae; Monomastix.;" source=
SSU ribosomal protein S14p
Eukaryote, probably algal Jill Banfield (10/16/14)
qh_10_scaffold_224_14
unknown

Not on your lists

comp(6488..6907)
DNA (420bp) protein (140aa)

This feature has no annotations

qh_10_scaffold_224_15
R_OD1_Uhrbacteria_47_25, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists


comp(7305..7679)
DNA (375bp) protein (125aa)
PREDICTED: 50S ribosomal protein L14-like n=1 Tax=Cucumis sativus RepID=UPI0002B47B72
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RIFCSPLOWO2_01_FULL_OD1_Uhrbacteria_47_25_curated
50S ribosomal protein L14
Eukaryote, probably algal Jill Banfield (10/16/14)
qh_10_scaffold_224_16

Not on your lists

comp(7850..8293)
DNA (444bp) protein (148aa)
Marine sediment metagenome DNA, contig: S01H1_S04248 {ECO:0000313|EMBL:GAF86814.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
qh_10_scaffold_224_16S_1
unknown

Not on your lists

comp(8323..9854)
DNA (1532bp)
? Kari Finstad (3/24/15)
qh_10_scaffold_224_17
Bathycoccus prasinos, Bathycoccus, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(10032..11615)
DNA (1584bp) protein (528aa)
Cytochrome c oxidase subunit 1 {ECO:0000256|RuleBase:RU000369}; EC=1.9.3.1 {ECO:0000256|RuleBase:RU000369};; TaxID=41875 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae;
Cytochrome c oxidase subunit 1 n=1 Tax=Bathycoccus prasinos RepID=K8EXI2_9CHLO
cytochrome C oxidase subunit I
qh_10_scaffold_224_18
Chlorokybus atmophyticus, Chlorokybus, Chlorokybales, Chlorokybophyceae, Streptophyta, Viridiplantae

Not on your lists

comp(12201..13403)
DNA (1203bp) protein (401aa)
NADH dehydrogenase subunit D (EC:1.6.5.3)
NADH dehydrogenase subunit 7 n=1 Tax=Chlorokybus atmophyticus RepID=A6YEB2_CHLAT
NADH dehydrogenase subunit 7 {ECO:0000313|EMBL:ABO15107.1}; TaxID=3144 species="Eukaryota; Viridiplantae; Streptophyta; Chlorokybophyceae; Chlorokybales; Chlorokybaceae; Chlorokybus.;" source="Chlorok
qh_10_scaffold_224_19
Micromonas sp. RCC299, Micromonas, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(13526..14311)
DNA (786bp) protein (262aa)
cytochrome-c oxidase (EC:1.9.3.1)
Cytochrome c oxidase subunit 3 n=1 Tax=Micromonas sp. (strain RCC299 / NOUM17) RepID=C1KRF8_MICSR
Cytochrome c oxidase subunit 3 {ECO:0000256|RuleBase:RU003375}; TaxID=296587 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas.;" so
qh_10_scaffold_224_20
Lobosphaera incisa, Lobosphaera, Chlorellales, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(14373..15125)
DNA (753bp) protein (251aa)
Cytochrome c oxidase subunit 2 n=1 Tax=Chlorella sp. ArM0029B RepID=U5U5P4_9CHLO
Cytochrome c oxidase subunit 2 {ECO:0000313|EMBL:AKF78669.1}; TaxID=312850 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Lobosphaera.;" source="Lobosph
cytochrome C oxidase subunit II
qh_10_scaffold_224_21
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15335..15808)
DNA (474bp) protein (158aa)
50S ribosomal protein L16 n=1 Tax=Azospirillum sp. CAG:260 RepID=R6I1Q2_9PROT
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; A
rplP; 50S ribosomal protein L16
Probably algal Jill Banfield (10/16/14)
qh_10_scaffold_224_22
Andalucia godoyi, Andalucia, Eukaryota

Not on your lists

comp(15889..17496)
DNA (1608bp) protein (536aa)
NADH-ubiquinone oxidoreductase chain 4 {ECO:0000256|RuleBase:RU003297}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU003297};; TaxID=505711 species="Eukaryota; Jakobida; Andalucia.;" source="Andalucia godoyi (F
NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Andalucia godoyi RepID=M4QCU1_9EUKA
NADH-quinone oxidoreductase chain 13
qh_10_scaffold_224_23
Microspora stagnorum, Microspora, Chlorophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(17483..19555)
DNA (2073bp) protein (691aa)
NADH-ubiquinone oxidoreductase chain 5 {ECO:0000256|RuleBase:RU003404, ECO:0000256|SAAS:SAAS00061106}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU003404, ECO:0000256|SAAS:SAAS00061108};; TaxID=163317 species=
putative NADH:ubiquinone oxidoreductase, membrane subunit L (EC:1.6.99.5)
NADH dehydrogenase subunit 5 n=2 Tax=Viridiplantae RepID=U5YGR7_9CHLO
qh_10_scaffold_224_24
unknown

Not on your lists

comp(19681..20208)
DNA (528bp) protein (176aa)

This feature has no annotations

qh_10_scaffold_224_25
Chlorokybus atmophyticus, Chlorokybus, Chlorokybales, Chlorokybophyceae, Streptophyta, Viridiplantae

Not on your lists

comp(20305..20661)
DNA (357bp) protein (119aa)
NADH-ubiquinone oxidoreductase chain 3 {ECO:0000256|RuleBase:RU003640}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU003640};; TaxID=3144 species="Eukaryota; Viridiplantae; Streptophyta; Chlorokybophyceae; Chlo
NADH-ubiquinone oxidoreductase chain 3 n=1 Tax=Chlorokybus atmophyticus RepID=A6YE80_CHLAT
nuoA; NADH-quinone oxidoreductase, subunit A
qh_10_scaffold_224_26
Tetraphis pellucida, Tetraphis, Tetraphidales, Tetraphidopsida, Streptophyta, Viridiplantae

Not on your lists

comp(21184..21690)
DNA (507bp) protein (169aa)
NADH-ubiquinone oxidoreductase chain 6 {ECO:0000256|RuleBase:RU004430}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU004430};; TaxID=37420 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta
NADH-ubiquinone oxidoreductase chain 6 n=1 Tax=Funaria hygrometrica RepID=F5CAC6_FUNHY
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
qh_10_scaffold_224_27
Micromonas sp. RCC299, Micromonas, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(21698..23218)
DNA (1521bp) protein (507aa)
NADH dehydrogenase subunit 2 n=1 Tax=Micromonas sp. (strain RCC299 / NOUM17) RepID=C1KRF9_MICSR
NADH dehydrogenase subunit 2 {ECO:0000313|EMBL:ACO55591.1}; TaxID=296587 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas.;" source
nuoN; NADH-quinone oxidoreductase, subunit N
qh_10_scaffold_224_28
Marsupiomonas sp. NIES 1824, Marsupiomonas, Marsupiomonadales, Pedinophyceae, Chlorophyta, Viridiplantae

Not on your lists


comp(23224..23955)
DNA (732bp) protein (244aa)
30S ribosomal protein S3 n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8LCX0_9CYAN
30S ribosomal protein S3, chloroplastic {ECO:0000256|HAMAP-Rule:MF_01309, ECO:0000256|RuleBase:RU003626}; TaxID=1562198 species="Eukaryota; Viridiplantae; Chlorophyta; Pedinophyceae; Marsupiomonadales
rpsC; 30S ribosomal protein S3
Eukaryote, probably algal Jill Banfield (10/16/14)
qh_10_scaffold_224_29
CG_CPR06_01, CG_CPR06, Bacteria

Not on your lists


comp(23940..24176)
DNA (237bp) protein (79aa)
30S ribosomal protein S19 n=5 Tax=Brachyspira RepID=RS19_BRAHW
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=CG_CPR06_01
30S ribosomal protein S19
Eukaryote, probably algal Jill Banfield (10/16/14)
Displaying items 1-30 of 33 in total

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