ggKbase home page

qh_10_scaffold_4213

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_4213_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(80..604)
-----------------
DNA (525bp)
protein (175aa)
Uncharacterized protein id=24648039 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH09168.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
qh_10_scaffold_4213_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

740..2785
-----------------
DNA (2046bp)
protein (682aa)
Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1PFH8_9EURY
Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain protein {ECO:0000313|EMBL:ERH09166.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" sourc
OB-fold tRNA/helicase-type nucleic acid binding-protein
qh_10_scaffold_4213_3
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2798..3172
-----------------
DNA (375bp)
protein (125aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI000374291F
Zinc finger CHY domain protein {ECO:0000313|EMBL:ELZ41897.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensi
CHY zinc finger family protein
qh_10_scaffold_4213_4
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3873..4946
-----------------
DNA (1074bp)
protein (358aa)
ORC1-type DNA replication protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1QVQ6_9EURY
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
cdc6; cell division control protein 6
qh_10_scaffold_4213_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


5022..6410
-----------------
DNA (1389bp)
protein (463aa)
GTP-binding signal recognition particle SRP54 G-domain-containing protein; K03106 signal recognition particle subunit SRP54 id=24648791 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Signal recognition particle 54 kDa protein {ECO:0000256|HAMAP-Rule:MF_00306}; Short=SRP54 {ECO:0000256|HAMAP-Rule:MF_00306};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacterial
GTP-binding signal recognition particle SRP54 G-domain-containing protein
qh_10_scaffold_4213_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6429..6851)
-----------------
DNA (423bp)
protein (141aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1PHP3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH09921.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
conserved hypothetical protein (DUF54)
qh_10_scaffold_4213_7
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6848..7417)
-----------------
DNA (570bp)
protein (190aa)
adenylate kinase (EC:2.7.1.24)
Adenylate kinase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M8S6_9EURY
Adenylate kinase {ECO:0000313|EMBL:EMA40815.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
qh_10_scaffold_4213_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7508..8101
-----------------
DNA (594bp)
protein (198aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1P056_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH09920.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
qh_10_scaffold_4213_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8173..8865
-----------------
DNA (693bp)
protein (231aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1085028 species=
endonuclease III id=24648786 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
endonuclease III
qh_10_scaffold_4213_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8909..9784
-----------------
DNA (876bp)
protein (292aa)
homoserine kinase (EC:2.7.1.39); K00872 homoserine kinase [EC:2.7.1.39] id=24645699 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384};; TaxID=10
Homoserine kinase
qh_10_scaffold_4213_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10161..10742)
-----------------
DNA (582bp)
protein (194aa)
alpha/beta hydrolase fold protein id=24645698 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Putative hydrolase or acyltransferases (Alpha/beta hydrolase superfamily) {ECO:0000313|EMBL:ERH09915.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophi
alpha/beta hydrolase fold protein
qh_10_scaffold_4213_12
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11048..11191
-----------------
DNA (144bp)
protein (48aa)
Dihydrodipicolinate synthase/N-acetylneuraminate lyase n=1 Tax=halophilic archaeon J07HX64 RepID=U1NZ77_9EURY
Dihydrodipicolinate synthase/N-acetylneuraminate lyase {ECO:0000313|EMBL:ERH09545.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX6
dihydrodipicolinate synthase/n-acetylneuraminate lyase
Displaying 12 items

View Taxonomy