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qh_10_scaffold_4417

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_4417_1
unknown

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comp(1..537)
DNA (537bp) protein (179aa)

This feature has no annotations

qh_10_scaffold_4417_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1472..1882
DNA (411bp) protein (137aa)
hypothetical protein
hypothetical protein id=24658731 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45410.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_10_scaffold_4417_3
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2346..2591
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI0003782AE6
Uncharacterized protein {ECO:0000313|EMBL:KIC47695.1}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" source="Tateyamaria sp. A
qh_10_scaffold_4417_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2625..3701
DNA (1077bp) protein (359aa)
hypothetical protein
hypothetical protein id=24657124 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH23275.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_10_scaffold_4417_5
unknown

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comp(3508..4098)
DNA (591bp) protein (197aa)

This feature has no annotations

qh_10_scaffold_4417_6
Homo sapiens, Homo, Primates, Mammalia, Chordata, Metazoa

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comp(4236..5408)
DNA (1173bp) protein (391aa)
cDNA FLJ61456, highly similar to Homo sapiens golgi autoantigen, golgin subfamily a-like, mRNA n=1 Tax=Homo sapiens RepID=B4DXR5_HUMAN
cDNA FLJ61456, highly similar to Homo sapiens golgi autoantigen, golgin subfamily a-like, mRNA {ECO:0000313|EMBL:BAG63477.1}; TaxID=9606 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Eu
uncharacterized LOC743860
qh_10_scaffold_4417_7
unknown

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5528..6133
DNA (606bp) protein (202aa)

This feature has no annotations

qh_10_scaffold_4417_8
unknown

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comp(6139..6369)
DNA (231bp) protein (77aa)

This feature has no annotations

qh_10_scaffold_4417_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6518..8578)
DNA (2061bp) protein (687aa)
Glycogen phosphorylase {ECO:0000313|EMBL:CBH23000.1}; EC=2.4.1.1 {ECO:0000313|EMBL:CBH23000.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
Glycogen phosphorylase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4P5_SALRM
glgP; glycogen phosphorylase
qh_10_scaffold_4417_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8812..9501)
DNA (690bp) protein (230aa)
short-chain dehydrogenase
short-chain dehydrogenase id=24658727 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Probable short-chain dehydrogenase {ECO:0000313|EMBL:CBH25913.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salini
qh_10_scaffold_4417_11
unknown

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comp(9840..9989)
DNA (150bp) protein (50aa)

This feature has no annotations

qh_10_scaffold_4417_12
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9986..10267)
DNA (282bp) protein (94aa)
MerR family transcriptional regulator n=1 Tax=Salisaeta longa RepID=UPI0003B3A97E
MerR family transcriptional regulator; K08365 MerR family transcriptional regulator, mercuric resistance operon regulatory protein Tax=RBG_16_Deltaproteobacteria_58_17_curated
merR; transcriptional regulator
qh_10_scaffold_4417_13
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10617..10808)
DNA (192bp) protein (64aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P2I0_9BRAD
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EKS35671.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
RNA polymerase ECF-type sigma factor
qh_10_scaffold_4417_14
Deinococcus deserti, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(10839..11276)
DNA (438bp) protein (146aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=546414 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deino
Uncharacterized protein n=1 Tax=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) RepID=C1D235_DEIDV
hypothetical protein
qh_10_scaffold_4417_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11744..13192
DNA (1449bp) protein (483aa)
sodium:solute symporter family protein
putP; sodium:proline symporter id=24658728 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Sodium:proline symporter {ECO:0000313|EMBL:CBH25914.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
qh_10_scaffold_4417_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13285..13587)
DNA (303bp) protein (101aa)
Lipoprotein, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZ15_SALRD
hypothetical protein
Lipoprotein, putative {ECO:0000313|EMBL:ABC46006.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
Displaying 16 items

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