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qh_10_scaffold_945

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_945_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(3..1856)
-----------------
DNA (1854bp)
protein (618aa)
inner membrane protein oxaA
inner membrane protein oxaA; K03217 preprotein translocase subunit YidC id=24656864 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_018
qh_10_scaffold_945_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2028..2480)
-----------------
DNA (453bp)
protein (151aa)
Ribonuclease P protein component n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4L8_SALRM
hypothetical protein
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rul
qh_10_scaffold_945_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2490..2654)
-----------------
DNA (165bp)
protein (55aa)
Ribosomal protein L34 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4L7_SALRM
rpmH; 50S ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qh_10_scaffold_945_4
unknown

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3131..3553
-----------------
DNA (423bp)
protein (141aa)

This feature has no annotations

qh_10_scaffold_945_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(3665..4342)
-----------------
DNA (678bp)
protein (226aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
sensor histidine kinase
sensor histidine kinase id=24656996 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qh_10_scaffold_945_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(4400..4690)
-----------------
DNA (291bp)
protein (97aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
two-component system sensory/regulatory protein
two-component sensor histidine kinase id=24657981 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qh_10_scaffold_945_7

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comp(4812..4988)
-----------------
DNA (177bp)
protein (59aa)
Marine sediment metagenome DNA, contig: S03H2_L03512 {ECO:0000313|EMBL:GAH42961.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
qh_10_scaffold_945_8
unknown

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comp(5034..5198)
-----------------
DNA (165bp)
protein (55aa)

This feature has no annotations

qh_10_scaffold_945_9
unknown

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comp(5195..5506)
-----------------
DNA (312bp)
protein (104aa)

This feature has no annotations

qh_10_scaffold_945_10
Pseudanabaena sp. PCC 7367, Pseudanabaena, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(5819..6997)
-----------------
DNA (1179bp)
protein (393aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI000363B5F4
filamentation induced by cAMP protein fic
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:AFY69725.1}; TaxID=82654 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Pseudanabaena.;" source="Pseudanabaena sp
qh_10_scaffold_945_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(7551..7667)
-----------------
DNA (117bp)
protein (39aa)
Sugar transporter subfamily n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RYP5_SALRD
sugar-transporter subfamily
Putative sugar-transporter subfamily {ECO:0000313|EMBL:CBH25983.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
Displaying 11 items

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