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qh_10_scaffold_376

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_376_1
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(2..343)
DNA (342bp) protein (114aa)
Pyruvate carboxyltransferase n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RXB9_HALTV
pyruvate carboxyltransferase
Pyruvate carboxyltransferase {ECO:0000313|EMBL:ADB61643.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (
qh_10_scaffold_376_2
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(649..3099)
DNA (2451bp) protein (817aa)
probable DEAD/DEAH box helicase (EC:3.6.4.-)
Helicase n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0C3U5_9EURY
Helicase {ECO:0000313|EMBL:ELZ16584.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 13563.;"
qh_10_scaffold_376_3
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3105..4634)
DNA (1530bp) protein (510aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0C1Q9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ16583.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
qh_10_scaffold_376_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4795..5148)
DNA (354bp) protein (118aa)
ABC-type transport system accessory transmembrane protein (Probable substrate branched-chain amino acids) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y0I8_NATM8
ABC-type transport system accessory transmembrane protein (probable substrate branched-chain amino acids)
ABC-type transport system accessory transmembrane protein {ECO:0000313|EMBL:CCQ35965.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;"
qh_10_scaffold_376_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5145..6335)
DNA (1191bp) protein (397aa)
ABC-type transport system permease protein (Probable substrate branched-chain amino acids) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPP1_NATM8
ABC-type transport system permease protein (probable substrate branched-chain amino acids)
ABC-type transport system permease protein {ECO:0000313|EMBL:CCQ35966.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natrono
qh_10_scaffold_376_6
uncultured haloarchaeon, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6590..7489)
DNA (900bp) protein (300aa)
UV DNA damage endonuclease n=2 Tax=Halobacteriaceae RepID=Q18IN1_HALWD
uvsE; UV damage endonuclease
UV DNA damage endonuclease {ECO:0000313|EMBL:ABQ75972.1}; TaxID=160804 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; environmental samples.;" source="uncultured hal
qh_10_scaffold_376_7
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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8918..9301
DNA (384bp) protein (128aa)
sensor box histidine kinase (EC:2.7.13.3)
HTR-like protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XIG8_9EURY
HTR-like protein {ECO:0000313|EMBL:ELY60468.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM 10524.
qh_10_scaffold_376_8
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(9596..10366)
DNA (771bp) protein (257aa)
Transcriptional regulator, TrmB n=1 Tax=Halogranum salarium B-1 RepID=J2Z9Z7_9EURY
Transcriptional regulator, TrmB {ECO:0000313|EMBL:EJN57475.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
transcriptional regulator
qh_10_scaffold_376_9
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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11463..12551
DNA (1089bp) protein (363aa)
Deoxyribodipyrimidine photolyase n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0E9W0_9EURY
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:ELZ43672.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DS
phr_3; deoxyribodipyrimidine photolyase
qh_10_scaffold_376_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13278..14456
DNA (1179bp) protein (393aa)
family 1 extracellular solute-binding protein id=24648338 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Spermidine/putrescine-binding periplasmic protein {ECO:0000313|EMBL:ERH09470.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
family 1 extracellular solute-binding protein
qh_10_scaffold_376_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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14627..15835
DNA (1209bp) protein (403aa)
polyamine-transporting ATPase (EC:3.6.3.31); K02052 putative spermidine/putrescine transport system ATP-binding protein id=24648339 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
polyamine-transporting ATPase (EC:3.6.3.31)
ABC-type spermidine/putrescine transport system, ATPase component {ECO:0000313|EMBL:ERH09471.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic arch
qh_10_scaffold_376_12
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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15832..16749
DNA (918bp) protein (306aa)
ABC transporter integral membrane protein; K11075 putrescine transport system permease protein id=24645254 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
ABC-type spermidine/putrescine transport system, permease component I {ECO:0000313|EMBL:ERH09472.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic
ABC transporter permease
qh_10_scaffold_376_13
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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16817..17635
DNA (819bp) protein (273aa)
potC1; spermidine/putrescine ABC transporter permease protein; K02053 putative spermidine/putrescine transport system permease protein id=24648341 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
ABC-type spermidine/putrescine transport system, permease component II {ECO:0000313|EMBL:ERH09473.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic
potC1; spermidine/putrescine ABC transporter permease protein
qh_10_scaffold_376_14
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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18496..19173
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VY76_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN02195.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
qh_10_scaffold_376_15
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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19176..19649
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LII6_HALWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC40238.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
qh_10_scaffold_376_16
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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19668..20156
DNA (489bp) protein (163aa)
TATA-box-binding protein C n=2 Tax=Halobacterium salinarum RepID=TBPC_HALSA
tbpC1; transcription factor
TATA-box-binding protein C; Box A-binding protein C; Short=BAP C;; TATA sequence-binding protein C; Short=TBP C;; TATA-box factor C; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobact
qh_10_scaffold_376_17
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(20092..20430)
DNA (339bp) protein (113aa)
Transposase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F498_9EURY
Transposase {ECO:0000313|EMBL:ELZ53474.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700873.;"
transposase
qh_10_scaffold_376_18
unknown

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comp(20539..21858)
DNA (1320bp) protein (440aa)

This feature has no annotations

qh_10_scaffold_376_19
unknown

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comp(21953..22144)
DNA (192bp) protein (64aa)

This feature has no annotations

qh_10_scaffold_376_20
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(23247..23423)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISR9_NATPD
hypothetical protein
HTH domain protein {ECO:0000313|EMBL:CAI48816.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
qh_10_scaffold_376_21
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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23885..24241
DNA (357bp) protein (119aa)
Zinc finger CHY domain protein n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0NJT6_9EURY
Zinc finger CHY domain protein {ECO:0000313|EMBL:EMA57374.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM
hypothetical protein
qh_10_scaffold_376_22
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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24284..24991
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1PK71_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH10846.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qh_10_scaffold_376_23
unknown

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25076..25216
DNA (141bp) protein (47aa)

This feature has no annotations

Displaying 23 items

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