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qh_10_scaffold_3510

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_3510_1
unknown

Not on your lists

comp(1..222)
DNA (222bp) protein (74aa)

This feature has no annotations

qh_10_scaffold_3510_2
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(321..2927)
DNA (2607bp) protein (869aa)
Elongation factor 2 n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W9V5_9EURY
elongation factor EF-2
Elongation factor 2 {ECO:0000256|HAMAP-Rule:MF_00054, ECO:0000256|SAAS:SAAS00088569}; Short=EF-2 {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natria
qh_10_scaffold_3510_3
unknown

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2932..3591
DNA (660bp) protein (220aa)

This feature has no annotations

qh_10_scaffold_3510_4
unknown

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3628..3867
DNA (240bp) protein (80aa)

This feature has no annotations

qh_10_scaffold_3510_5
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4379..5935
DNA (1557bp) protein (519aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1NBQ7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG94325.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
qh_10_scaffold_3510_6
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6090..6365
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1MV84_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG94324.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
transcriptional regulator
qh_10_scaffold_3510_7
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6374..6667
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1N514_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG91690.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
qh_10_scaffold_3510_8
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6743..7276
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LLA1_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA34362.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
qh_10_scaffold_3510_9
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7391..7972)
DNA (582bp) protein (194aa)
30S ribosomal protein S7 n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JPH4_HALVA
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480, ECO:0000256|RuleBase:RU003621}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;"
rps7P; 30S ribosomal protein S7
qh_10_scaffold_3510_10
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(7974..8402)
DNA (429bp) protein (143aa)
30S ribosomal protein S12 n=2 Tax=Archaea RepID=U1QCP4_9EURY
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" so
ribosomal protein S23
qh_10_scaffold_3510_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8503..8937)
DNA (435bp) protein (145aa)
Transcription elongation factor NusA-like protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIH0_9EURY
transcription elongation factor NusA-like protein
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source=
qh_10_scaffold_3510_12
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9010..10044)
DNA (1035bp) protein (345aa)
DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6) id=24649255 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
rpoA''; DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6)
DNA-directed RNA polymerase, beta' subunit/160 kD subunit {ECO:0000313|EMBL:ERH10348.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07
qh_10_scaffold_3510_13
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10106..10849)
DNA (744bp) protein (248aa)
DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6) id=24649255 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
rpoA2; DNA-directed RNA polymerase subunit A (EC:2.7.7.6)
DNA-directed RNA polymerase, beta' subunit/160 kD subunit {ECO:0000313|EMBL:ERH10348.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07
qh_10_scaffold_3510_14
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10851..12905)
DNA (2055bp) protein (685aa)
rpoA'; DNA-directed RNA polymerase subunit A' (EC:2.7.7.6); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=24649256 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="haloph
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
qh_10_scaffold_3510_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12902..14149)
DNA (1248bp) protein (416aa)
rpoA1; DNA-directed RNA polymerase subunit A' (subunit A) (EC:2.7.7.6)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
DNA-directed RNA polymerase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CGM0_9EURY
qh_10_scaffold_3510_16
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14116..14841)
DNA (726bp) protein (242aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="haloph
DNA-directed RNA polymerase n=1 Tax=halophilic archaeon J07HX64 RepID=U1PJR6_9EURY
DNA-directed RNA polymerase subunit A'
Displaying 16 items

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