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qh_10_scaffold_643

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_643_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..995)
DNA (993bp) protein (331aa)
Sodium/calcium exchanger membrane subunit n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N736_9EURY
Sodium/calcium exchanger membrane subunit {ECO:0000313|EMBL:EMA53747.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
sodium/calcium exchanger membrane subunit
qh_10_scaffold_643_2
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1237..2133
DNA (897bp) protein (299aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=931277 species="Archaea; Euryar
Shikimate dehydrogenase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MIW5_HALMO
shikimate 5-dehydrogenase
qh_10_scaffold_643_3
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2158..3039
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4B1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51500.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
fbl; receptin fbl
qh_10_scaffold_643_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3152..4030
DNA (879bp) protein (293aa)
Branched-chain amino acid aminotransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9F6_9EURY
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:EMA53744.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
class IV aminotransferase
qh_10_scaffold_643_5
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4346..5416
DNA (1071bp) protein (357aa)
Protein pelota homolog {ECO:0000256|HAMAP-Rule:MF_01853, ECO:0000256|SAAS:SAAS00004956}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01853, ECO:0000256|SAAS:SAAS00011872};; TaxID=1132509 species="Archaea; E
Protein pelota homolog n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LTW4_9EURY
translation release factor pelota
qh_10_scaffold_643_6
RLO_RIF05_58_11, RIF5, Bacteria

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5762..7132
DNA (1371bp) protein (457aa)
ADP-ribosylglycohydrolase n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EZ91_9BACT
ADP-ribosylglycohydrolase Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
ADP-ribosylglycohydrolase
qh_10_scaffold_643_7

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7338..8033
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XUY9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS02367.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
signal transduction histidine kinase LytS
qh_10_scaffold_643_8
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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8030..8806
DNA (777bp) protein (259aa)
Cobalt transport protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUT4_RUBXD
cobalt transport protein
Cobalt transport protein {ECO:0000313|EMBL:ABG04844.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubro
qh_10_scaffold_643_9
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

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8803..10758
DNA (1956bp) protein (652aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IVQ2_9CLOT
ATPase component of ABC-type transport system {ECO:0000313|EMBL:ETP73465.1}; TaxID=1165092 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacteriu
ATPase component of general energizing module of ECF transporters
qh_10_scaffold_643_10
unknown

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comp(10661..11320)
DNA (660bp) protein (220aa)

This feature has no annotations

qh_10_scaffold_643_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12008..12430)
DNA (423bp) protein (141aa)
Beta-lactamase domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3L0_9EURY
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:EMA52456.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
metal-dependent hydrolase
Displaying 11 items

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