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qh_10_scaffold_1483

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_1483_1
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1..1227
DNA (1227bp) protein (409aa)
Extracellular solute-binding protein, family 5 n=2 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTI8_HALBP
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ELY23089.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeome
qh_10_scaffold_1483_2
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1292..2269
DNA (978bp) protein (326aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTI9_HALBP
dipeptide/oligopeptide/nickel ABC transporter permease
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:ADQ65934.1}; Dipeptide/oligopeptide/nickel ABC transporter permease {ECO:0000313|EMBL:ELY23090.1}; TaxID=4
qh_10_scaffold_1483_3
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2274..3254
DNA (981bp) protein (327aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTJ0_HALBP
dipeptide/oligopeptide/nickel ABC transporter permease
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:ADQ65935.1}; Dipeptide/oligopeptide/nickel ABC transporter permease {ECO:0000313|EMBL:ELY23091.1}; TaxID=4
qh_10_scaffold_1483_4
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3519..4160
DNA (642bp) protein (214aa)
Oligopeptide/dipeptide ABC transporter ATP-binding protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTJ1_HALBP
oligopeptide/dipeptide ABC transporter ATP-binding protein
Oligopeptide/dipeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELY23092.1}; Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ADQ65936.1}; TaxID=469382 specie
qh_10_scaffold_1483_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4161..5285
DNA (1125bp) protein (375aa)
Oligopeptide/dipeptide ABC transporter ATP-binding protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGC9_9EURY
Oligopeptide/dipeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ33868.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;"
oligopeptide/dipeptide ABC transporter ATP-binding protein
qh_10_scaffold_1483_6
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5306..6676)
DNA (1371bp) protein (457aa)
Zn-dependent protease-like protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DEH3_9EURY
Zn-dependent protease-like protein {ECO:0000313|EMBL:ELZ33870.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum
zn-dependent protease-like protein
qh_10_scaffold_1483_7
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6825..7271)
DNA (447bp) protein (149aa)
N-acetyltransferase GCN5 n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D5U6_9EURY
N-acetyltransferase GCN5 {ECO:0000313|EMBL:ELZ30850.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum
N-acetyltransferase GCN5
qh_10_scaffold_1483_8
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7404..7790
DNA (387bp) protein (129aa)
ArsR family transcriptional regulator n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGS9_9EURY
ArsR family transcriptional regulator {ECO:0000313|EMBL:ELZ33927.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometri
ArsR family transcriptional regulator
qh_10_scaffold_1483_9
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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7791..8756
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WLA2_9EURY
permease
Uncharacterized protein {ECO:0000313|EMBL:ELY50244.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 106
qh_10_scaffold_1483_10

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8817..9845
DNA (1029bp) protein (343aa)
Threonine ammonia-lyase (EC:4.3.1.19)
Threonine ammonia-lyase {ECO:0000313|EMBL:AEN06953.1}; EC=4.3.1.19 {ECO:0000313|EMBL:AEN06953.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Threonine ammonia-lyase n=1 Tax=halophilic archaeon DL31 RepID=G2MN24_9ARCH
qh_10_scaffold_1483_11
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9907..10149)
DNA (243bp) protein (81aa)
hypothetical protein id=24614959 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP88468.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qh_10_scaffold_1483_12
unknown

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10379..10918
DNA (540bp) protein (180aa)

This feature has no annotations

qh_10_scaffold_1483_13
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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11082..11498
DNA (417bp) protein (139aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113, ECO:0000313|EMBL:EMA32446.1}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=358396 species="
DNA polymerase IV n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LFX9_9EURY
nucleotidyltransferase/DNA polymerase
Displaying 13 items

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