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qh_10_scaffold_1087

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_1087_1
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..305)
DNA (303bp) protein (101aa)
Transcription factor E n=4 Tax=Haloarcula RepID=G0HRC3_HALHT
tfeA; transcription initiation factor IIE alpha subunit
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Tr
qh_10_scaffold_1087_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(473..1009)
DNA (537bp) protein (179aa)
tRNA (cytidine(56)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00077}; EC=2.1.1.206 {ECO:0000256|HAMAP-Rule:MF_00077};; tRNA ribose 2'-O-methyltransferase aTrm56 {ECO:0000256|HAMAP-Rule:MF_0007
tRNA (cytidine(56)-2'-O)-methyltransferase n=1 Tax=halophilic archaeon J07HX64 RepID=U1QUS9_9EURY
hypothetical protein
qh_10_scaffold_1087_3
unknown

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comp(1018..1173)
DNA (156bp) protein (52aa)

This feature has no annotations

qh_10_scaffold_1087_4
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1507..2589
DNA (1083bp) protein (361aa)
Replication factor A n=1 Tax=halophilic archaeon J07HX64 RepID=U1PGB7_9EURY
Replication factor A {ECO:0000313|EMBL:ERH09134.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
replication factor A
qh_10_scaffold_1087_5
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2586..3959
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AD72_NATGS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ71853.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium gregoryi (s
qh_10_scaffold_1087_6
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3959..4705
DNA (747bp) protein (249aa)
Metallophosphoesterase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NY70_HALMD
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ACV48530.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (
qh_10_scaffold_1087_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4702..5196)
DNA (495bp) protein (165aa)
cyclase/dehydrase id=24645263 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH09481.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
cyclase/dehydrase
qh_10_scaffold_1087_8
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5279..6535)
DNA (1257bp) protein (419aa)
gdhA2; glutamate dehydrogenase (NAD(P)+) (EC:1.4.1.3)
Glutamate dehydrogenase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KRW2_9EURY
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JC
qh_10_scaffold_1087_9
unknown

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6675..7169
DNA (495bp) protein (165aa)

This feature has no annotations

qh_10_scaffold_1087_10
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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7227..8090
DNA (864bp) protein (288aa)
short chain dehydrogenase (EC:1.1.1.-)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VTH0_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ELY40454.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum
qh_10_scaffold_1087_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8596..8775
DNA (180bp) protein (60aa)
secE; protein translocase subunit SecE id=24644251 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; Protein transport protein Sec61 gamma subunit homolog {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1085028 species="Archaea; Euryarchaeo
secE; protein translocase subunit SecE
qh_10_scaffold_1087_12
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8794..9099
DNA (306bp) protein (102aa)
nusG; transcription antitermination protein NusG id=24654889 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
NusG antitermination factor
Displaying 12 items

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