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qh_10_scaffold_2847

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_2847_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..1156
DNA (1155bp) protein (385aa)
Translation initiation factor 2 subunit gamma n=1 Tax=halophilic archaeon J07HX64 RepID=U1QWY0_9EURY
Translation initiation factor 2 subunit gamma {ECO:0000256|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; TaxID=1085028 species="Arc
translation initiation factor 2 subunit gamma
qh_10_scaffold_2847_2
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1153..1533
DNA (381bp) protein (127aa)
nucleotide binding protein PINc n=1 Tax=Halomicrobium katesii RepID=UPI0003651AD4
SSU processome protein Utp24
SSU processome protein Utp24 {ECO:0000313|EMBL:ACV46860.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukoha
qh_10_scaffold_2847_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1537..2115
DNA (579bp) protein (193aa)
DNA-directed RNA polymerase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZV1_HALMD
DNA-directed RNA polymerase subunit E'
DNA-directed RNA polymerase {ECO:0000313|EMBL:ACV46859.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohat
qh_10_scaffold_2847_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2115..2312
DNA (198bp) protein (66aa)
Transcription elongation factor Spt4 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D171_9EURY
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimple
rpoE''; DNA-directed RNA polymerase subunit E''
qh_10_scaffold_2847_5
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2314..2883
DNA (570bp) protein (190aa)
UPF0218 protein C443_12281 n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KLJ4_HALAR
UPF0218 protein C443_12281 {ECO:0000256|HAMAP-Rule:MF_00590}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentine
conserved hypothetical protein (DUF359)
qh_10_scaffold_2847_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2894..3232)
DNA (339bp) protein (113aa)
RNA methylase; K07446 tRNA (guanine10-N2)-dimethyltransferase [EC:2.1.1.213] id=24647374 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
N2-methylguanosine tRNA methyltransferase {ECO:0000313|EMBL:ERH08522.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
putative DNA modification methylase
qh_10_scaffold_2847_7
unknown

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3442..3945
DNA (504bp) protein (168aa)

This feature has no annotations

qh_10_scaffold_2847_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3974..4534
DNA (561bp) protein (187aa)
TATA-box-binding protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1PDU1_9EURY
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rul
TATA-box binding family protein
qh_10_scaffold_2847_9
unknown

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4614..4829
DNA (216bp) protein (72aa)

This feature has no annotations

qh_10_scaffold_2847_10
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4836..5903)
DNA (1068bp) protein (356aa)
Modification methylase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.113 {ECO:0000256|RuleBase:RU362026};; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostag
DNA methylase N-4/N-6 domain-containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR10_9EURY
modification methylase
qh_10_scaffold_2847_11
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5936..6781)
DNA (846bp) protein (282aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-R
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JP25_HALVA
qh_10_scaffold_2847_12

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7010..7831
DNA (822bp) protein (274aa)
Putative metal-dependent membrane protease n=1 Tax=uncultured archaeon A07HR67 RepID=V4XWQ8_9ARCH
Putative metal-dependent membrane protease {ECO:0000313|EMBL:ESS03007.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
hypothetical protein
Displaying 12 items

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