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QH_10_Halobacteriales_70_44

In projects: QH_10  |  diaphorachaeota  |  archaea_ggkbase

Consensus taxonomy: Halobacteriales  →  Halobacteria  →  Euryarchaeota  →  Archaea

Taxonomy override: Euryarchaeota

Metagenomic Context

Parent: QH_10_UNK

Properties

Avg. coverage: 43.95 Longest contig: 9.36 Kbp Bin length: 1.07 Mbp GC content: 70.13 %
Contigs count: 253 Features count: 1334 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 8 / 55 BSCG 10 / 51 MC: 2 ASCG 14 / 38 MC: 1
Displaying items 51-100 of 253 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_10_scaffold_10145
Order: Halobacteriales (57.14%)
7 5396 bp 70.96 41.81 91.85
qh_10_scaffold_3408
Species: Natronomonas moolapensis (57.14%)
7 6193 bp 73.45 48.58 86.57
qh_10_scaffold_8166
Order: Halobacteriales (85.71%)
7 5390 bp 73.53 45.27 81.82
qh_10_scaffold_13871
Class: Halobacteria (57.14%)
7 3088 bp 68.01 29.37 92.58
qh_10_scaffold_12260
Genus: Natronomonas (57.14%)
7 6197 bp 70.70 44.05 93.58
qh_10_scaffold_14143
Order: Halobacteriales (71.43%)
7 3963 bp 69.16 48.50 73.20
qh_10_scaffold_9526
Order: Halobacteriales (100%)
6 3424 bp 69.66 46.50 89.89
qh_10_scaffold_9529
Genus: Natronomonas (50%)
6 3034 bp 71.03 46.04 88.20
qh_10_scaffold_15553
Order: Halobacteriales (50%)
6 3863 bp 71.06 39.35 89.08
qh_10_scaffold_12952
Species: Natronomonas pharaonis (50%)
6 3486 bp 69.16 42.66 80.03
qh_10_scaffold_13959
Species: Natronomonas pharaonis (50%)
6 3324 bp 65.13 34.69 71.12
qh_10_scaffold_17437
Species: Natronomonas pharaonis (50%)
6 3413 bp 67.10 39.47 64.08
qh_10_scaffold_9329
Species: Natronomonas pharaonis (50%)
6 5061 bp 68.13 37.62 79.61
qh_10_scaffold_2798
Species: uncultured archaeon A07HR67 (50%)
6 5593 bp 69.44 40.85 86.84
qh_10_scaffold_18142
Class: Halobacteria (83.33%)
6 3500 bp 71.97 56.40 79.46
qh_10_scaffold_4197
Order: Halobacteriales (50%)
6 7337 bp 73.34 54.29 94.41
qh_10_scaffold_12762
Order: Halobacteriales (50%)
6 4555 bp 70.27 50.71 90.89
qh_10_scaffold_8748
Species: Halomicrobium mukohataei (50%)
6 4410 bp 70.02 29.18 83.27
qh_10_scaffold_5963
Class: Halobacteria (66.67%)
6 3688 bp 72.23 35.09 77.68
qh_10_scaffold_16324
Species: Natronomonas pharaonis (83.33%)
6 3560 bp 64.13 40.28 58.74
qh_10_scaffold_14241
Species: Natronomonas moolapensis (50%)
6 3344 bp 71.26 36.81 95.19
qh_10_scaffold_15207
Species: Natronomonas moolapensis (50%)
6 3512 bp 63.84 43.56 72.95
qh_10_scaffold_23096
Genus: Natronomonas (50%)
6 4078 bp 67.83 56.36 79.75
qh_10_scaffold_7745
Genus: Natronomonas (50%)
6 4821 bp 71.62 40.07 94.34
qh_10_scaffold_6595
Genus: Natronomonas (50%)
6 4639 bp 65.45 45.14 77.93
qh_10_scaffold_9406
Species: Natronomonas moolapensis (50%)
6 3975 bp 73.21 53.46 96.23
qh_10_scaffold_10565
Order: Halobacteriales (66.67%)
6 5659 bp 70.79 53.74 78.72
qh_10_scaffold_11782
Genus: Natronomonas (66.67%)
6 3083 bp 71.13 44.37 94.68
qh_10_scaffold_15430
Genus: Natronomonas (50%)
6 4902 bp 72.40 40.76 78.95
qh_10_scaffold_10340
Species: Natronomonas pharaonis (50%)
6 4856 bp 69.13 34.88 88.47
qh_10_scaffold_9420
Genus: Natronomonas (66.67%)
6 5875 bp 67.86 53.34 87.78
qh_10_scaffold_5807
Class: Halobacteria (66.67%)
6 5964 bp 70.39 34.61 85.01
qh_10_scaffold_11581
Species: Natronomonas moolapensis (50%)
6 4005 bp 70.29 49.74 80.15
qh_10_scaffold_4391
Order: Halobacteriales (50%)
6 5853 bp 71.93 51.39 91.49
qh_10_scaffold_11357
Order: Halobacteriales (50%)
6 3431 bp 69.45 45.06 77.56
qh_10_scaffold_5136
Species: Natronomonas pharaonis (50%)
6 4677 bp 71.88 44.96 91.85
qh_10_scaffold_8626
Species: Natronomonas pharaonis (66.67%)
6 3774 bp 69.13 52.00 77.42
qh_10_scaffold_2340
Order: Halobacteriales (66.67%)
6 5088 bp 65.70 34.94 99.47
qh_10_scaffold_6894
Order: Halobacteriales (66.67%)
6 5312 bp 71.37 43.41 74.32
qh_10_scaffold_17812
Order: Halobacteriales (83.33%)
6 4675 bp 69.43 45.61 80.47
qh_10_scaffold_6443
Species: Natronomonas moolapensis (50%)
6 5660 bp 71.18 51.04 65.72
qh_10_scaffold_11158
Species: Natronomonas pharaonis (50%)
6 3953 bp 70.05 31.17 82.95
qh_10_scaffold_4415
Species: Natronomonas pharaonis (83.33%)
6 4780 bp 68.20 43.87 83.47
qh_10_scaffold_12015
Class: Halobacteria (50%)
6 5617 bp 70.25 44.11 65.75
qh_10_scaffold_12250
Class: Halobacteria (50%)
6 3583 bp 70.61 51.72 84.82
qh_10_scaffold_7845
Order: Halobacteriales (50%)
6 3605 bp 63.13 24.47 76.89
qh_10_scaffold_2723
Genus: Natronomonas (66.67%)
6 5867 bp 71.21 53.11 79.41
qh_10_scaffold_3430
Species: Natronomonas moolapensis (50%)
6 5216 bp 70.11 44.42 93.98
qh_10_scaffold_6119
Genus: Natronomonas (50%)
6 3669 bp 70.43 47.04 91.33
qh_10_scaffold_5184
Species: Natronomonas moolapensis (50%)
6 3998 bp 71.89 48.40 80.07
Displaying items 51-100 of 253 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.