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qh_10_scaffold_887

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_887_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..233)
DNA (231bp) protein (77aa)
proteasome subunit alpha (EC:3.4.25.1)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
Proteasome subunit alpha n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLH6_9EURY
qh_10_scaffold_887_2
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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562..1701
DNA (1140bp) protein (380aa)
ribose ABC transporter extracellular binding protein; K10439 ribose transport system substrate-binding protein id=24624618 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:ERG99982.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" sourc
hypothetical protein
qh_10_scaffold_887_3
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1712..2728
DNA (1017bp) protein (339aa)
transporter permease id=24624619 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component {ECO:0000313|EMBL:ERG99983.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacac
hypothetical protein
qh_10_scaffold_887_4
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2725..3594
DNA (870bp) protein (290aa)
monosaccharide ABC-transport system ATP binding protein id=24624620 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
ABC-type sugar transport system, ATPase component {ECO:0000313|EMBL:ERG99984.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Ha
hypothetical protein
qh_10_scaffold_887_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3591..3962
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DB08_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ32636.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
qh_10_scaffold_887_6
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3973..4311)
DNA (339bp) protein (113aa)
Ribonuclease P protein component 2 {ECO:0000256|HAMAP-Rule:MF_00755}; Short=RNase P component 2 {ECO:0000256|HAMAP-Rule:MF_00755};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00755};; Pop5 {ECO:0000256|HA
RNase P/RNase MRP subunit POP5 (EC:3.1.26.5)
Ribonuclease P protein component 2 n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X8H8_9EURY
qh_10_scaffold_887_7
unknown

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4428..4583
DNA (156bp) protein (52aa)

This feature has no annotations

qh_10_scaffold_887_8
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4628..5992
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TZ03_9EURY
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:EMA10432.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloar
livJ; ABC-type branched-chain amino acid transport systems, substrate-binding protein
qh_10_scaffold_887_9
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6152..7351
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0U5F0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA10431.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
hypothetical protein
qh_10_scaffold_887_10
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7443..8153)
DNA (711bp) protein (237aa)
Branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JRZ3_9EURY
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA10430.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;
livF; ABC-type branched-chain amino acid transport systems, ATP-binding protein I
qh_10_scaffold_887_11
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8156..9124)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SW79_9EURY
ABC-type branched-chain amino acid transport system, ATP-binding protein II {ECO:0000313|EMBL:EMA10429.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
livG; ABC-type branched-chain amino acid transport systems, ATP-binding protein II
qh_10_scaffold_887_12
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9121..10800)
DNA (1680bp) protein (560aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SVV7_9EURY
ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:ERG92735.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloq
livM3; ABC-type transport system permease protein (probable substrate branched-chain amino acids)
qh_10_scaffold_887_13
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10802..12265)
DNA (1464bp) protein (488aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JMQ2_9EURY
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:EMA10427.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="H
livH3; ABC-type transport system permease protein (probable substrate branched-chain amino acids)
Displaying 13 items

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