ggKbase home page

qh_10_scaffold_260

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_260_1
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..672
DNA (672bp) protein (224aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MRX4_HALMO
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EMA48103.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus m
short-chain dehydrogenase/reductase SDR
qh_10_scaffold_260_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

745..1566
DNA (822bp) protein (274aa)
Peptidase M29 aminopeptidase II n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N227_9EURY
Peptidase M29 aminopeptidase II {ECO:0000313|EMBL:EMA50765.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
peptidase M29 aminopeptidase II
qh_10_scaffold_260_3
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1569..2054
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PR01_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ35031.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
qh_10_scaffold_260_4
unknown

Not on your lists

2083..2715
DNA (633bp) protein (211aa)

This feature has no annotations

qh_10_scaffold_260_5
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2727..4733)
DNA (2007bp) protein (669aa)
tRNA-guanine transglycosylase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W940_9EURY
tRNA-guanine transglycosylase
tRNA-guanine transglycosylase {ECO:0000313|EMBL:AGN01169.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht
qh_10_scaffold_260_6
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5543..5956
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2DLP6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERJ06692.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
hypothetical protein
qh_10_scaffold_260_7
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6020..6370
DNA (351bp) protein (117aa)
PD-D/EXK nuclease superfamily protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PGS0_9EURY
hypothetical protein
PD-D/EXK nuclease superfamily protein {ECO:0000313|EMBL:ERJ06693.1}; Uncharacterized protein {ECO:0000313|EMBL:CCQ33890.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales
qh_10_scaffold_260_8
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6386..7042
DNA (657bp) protein (219aa)
PD-D/EXK nuclease superfamily protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PGS0_9EURY
hypothetical protein
PD-D/EXK nuclease superfamily protein {ECO:0000313|EMBL:ERJ06693.1}; Uncharacterized protein {ECO:0000313|EMBL:CCQ33890.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales
qh_10_scaffold_260_9
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7047..7301
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CBE7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ19234.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
qh_10_scaffold_260_10
unknown

Not on your lists

comp(7388..7891)
DNA (504bp) protein (168aa)

This feature has no annotations

qh_10_scaffold_260_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7957..8886)
DNA (930bp) protein (310aa)
Membrane-bound metal-dependent hydrolase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D117_9EURY
Membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:ELZ29135.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimple
membrane-bound metal-dependent hydrolase
qh_10_scaffold_260_12
unknown

Not on your lists

comp(8998..9150)
DNA (153bp) protein (51aa)

This feature has no annotations

qh_10_scaffold_260_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9462..10127
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D3H9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29252.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
CDP-alcohol phosphatidyltransferase
qh_10_scaffold_260_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10162..10926)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D163_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29251.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_10_scaffold_260_15
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10923..11582)
DNA (660bp) protein (220aa)
Ribonuclease BN n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PNW9_9EURY
ribonuclease BN
Ribonuclease BN {ECO:0000313|EMBL:CCQ33637.1}; Ribonuclease BN protein {ECO:0000313|EMBL:ERJ05368.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Ha
qh_10_scaffold_260_16
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11699..12085
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D316_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29248.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_10_scaffold_260_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12125..13252)
DNA (1128bp) protein (376aa)
tRNA (guanine(26)-N(2))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00290}; EC=2.1.1.216 {ECO:0000256|HAMAP-Rule:MF_00290};; tRNA 2,2-dimethylguanosine-26 methyltransferase {ECO:0000256|HAMAP-Rule:
N2,N2-dimethylguanosine tRNA methyltransferase (EC:2.1.1.32)
tRNA (guanine(26)-N(2))-dimethyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D159_9EURY
qh_10_scaffold_260_18
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13404..14831
DNA (1428bp) protein (476aa)
Pyrrolo-quinoline quinone n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY33_9EURY
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:ELZ26804.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
pyrrolo-quinoline quinone
qh_10_scaffold_260_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14894..15166
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CVX4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ26803.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_10_scaffold_260_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


15290..15979
DNA (690bp) protein (230aa)
Ham1 protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWH2_9EURY
Ham1 protein {ECO:0000313|EMBL:ELZ26802.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
deoxyribonucleotide triphosphate pyrophosphatase
qh_10_scaffold_260_21
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16117..17652
DNA (1536bp) protein (512aa)
Putative signal-transducing histidine kinase / response regulator n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0DPE2_9EURY
Putative signal-transducing histidine kinase / response regulator {ECO:0000313|EMBL:ELZ37355.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.
chemotaxis protein CheY
qh_10_scaffold_260_22
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17656..18357)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUA1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ26801.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_10_scaffold_260_23
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18606..19274)
DNA (669bp) protein (223aa)
TRK potassium uptake system protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CU74_9EURY
TRK potassium uptake system protein {ECO:0000313|EMBL:ELZ26800.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex car
TrkA-N domain protein
qh_10_scaffold_260_24
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19485..20105
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI0003659599
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47314.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qh_10_scaffold_260_25
unknown

Not on your lists

20109..20285
DNA (177bp) protein (59aa)

This feature has no annotations

qh_10_scaffold_260_26
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20416..21459
DNA (1044bp) protein (348aa)
DNA repair and recombination protein RadA n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D3F8_9EURY
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halos
radA; DNA repair and recombination protein RadA
qh_10_scaffold_260_27
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21541..21780
DNA (240bp) protein (80aa)
Glutaredoxin n=2 Tax=Haloarcula hispanica RepID=G0HW60_HALHT
grx; glutaredoxin
Glutaredoxin {ECO:0000313|EMBL:AEM56482.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain ATCC 33960
qh_10_scaffold_260_28
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21790..22629)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1B2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29230.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
qh_10_scaffold_260_29
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22664..23074)
DNA (411bp) protein (137aa)
msrB; peptide methionine sulfoxide reductase MsrB (EC:1.8.4.12)
Methionine-R-sulfoxide reductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4X4_9EURY
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:ELZ29229.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsb
qh_10_scaffold_260_30

Not on your lists

comp(23375..23551)
DNA (177bp) protein (59aa)
CopG family transcripitonal regulator n=1 Tax=Halomicrobium katesii RepID=UPI000378350B
Transcriptional regulator, CopG family protein {ECO:0000313|EMBL:ESS08675.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
CopG family transcripitonal regulator
Displaying items 1-30 of 33 in total

View Taxonomy